Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H10
(545 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 73 6e-15
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 73 6e-15
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 45 1e-06
EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein. 42 1e-05
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 24 2.8
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 6.6
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 72.9 bits (171), Expect = 6e-15
Identities = 50/155 (32%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Frame = +1
Query: 76 QPAPMEPHSTLYDYDRSREHTLLIG----AKFAVLMTGYLEDKNQLRPNSLVINGA---T 234
QP +P+S LYD+D + H +L+ A G L P SL+ING
Sbjct: 305 QPPSRDPNSHLYDFDLTT-HIMLVSDWLHEDAAERYPGRLAVNTGQDPESLLINGKGQFR 363
Query: 235 DGSKLF----------VLPGYAYRLRIVNAVAIECPXXXXXXXXXXXXXXXXGKPVKGTI 384
D + F + PG YR R++NA A CP G+PV
Sbjct: 364 DPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEGHALTVIATDGEPVHPVQ 423
Query: 385 ARNLQLFPGERMDFVVRASAPSGGYWVRVRGEGAC 489
+ F GER DFV+ A P G YW+++RG G C
Sbjct: 424 VNTIISFSGERYDFVITADQPVGAYWIQLRGLGEC 458
Score = 25.4 bits (53), Expect = 1.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 11 YFYHADSVSHHSDGVYGSLIV 73
+F+HA + DG+YGS++V
Sbjct: 283 HFWHAHTGLQKLDGLYGSIVV 303
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 72.9 bits (171), Expect = 6e-15
Identities = 50/155 (32%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Frame = +1
Query: 76 QPAPMEPHSTLYDYDRSREHTLLIG----AKFAVLMTGYLEDKNQLRPNSLVINGA---T 234
QP +P+S LYD+D + H +L+ A G L P SL+ING
Sbjct: 305 QPPSRDPNSHLYDFDLTT-HIMLVSDWLHEDAAERYPGRLAVNTGQDPESLLINGKGQFR 363
Query: 235 DGSKLF----------VLPGYAYRLRIVNAVAIECPXXXXXXXXXXXXXXXXGKPVKGTI 384
D + F + PG YR R++NA A CP G+PV
Sbjct: 364 DPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEGHALTVIATDGEPVHPAQ 423
Query: 385 ARNLQLFPGERMDFVVRASAPSGGYWVRVRGEGAC 489
+ F GER DFV+ A P G YW+++RG G C
Sbjct: 424 VNTIISFSGERYDFVITADQPVGAYWIQLRGLGEC 458
Score = 25.4 bits (53), Expect = 1.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 11 YFYHADSVSHHSDGVYGSLIV 73
+F+HA + DG+YGS++V
Sbjct: 283 HFWHAHTGLQKLDGLYGSIVV 303
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 45.2 bits (102), Expect = 1e-06
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 GYAYRLRIVNAVAIECPXXXXXXXXXXXXXXXXGKPVKGTI-ARNLQLFPGERMDFVVRA 438
G YR R++NA + CP G ++ + + GER DF+V+A
Sbjct: 608 GRRYRFRLINAEFLNCPVELSIENHNLTVIASDGFGIQPLEDLGSFVSYAGERFDFIVKA 667
Query: 439 SAPSGGYWVRVRGEGACEGLTTKA 510
+ P G Y +R RG C+ T A
Sbjct: 668 NQPIGNYLIRFRGLMDCDERFTSA 691
Score = 23.4 bits (48), Expect = 5.0
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 11 YFYHADSVSHHSDGVYGSLIV 73
+F+H+ + DG +G+LI+
Sbjct: 420 HFWHSHTGMQRGDGAFGALII 440
>EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein.
Length = 661
Score = 41.9 bits (94), Expect = 1e-05
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 18/159 (11%)
Frame = +1
Query: 76 QPAPMEPHSTLYDYDRSREHTLLIGAKFA-----VLMTGYLEDKNQLRPNSLVINGA--- 231
+P ++P+ LY YD + H +L G+ + + M G L + P +L+ING
Sbjct: 203 EPKRVDPNGDLYHYD-TPAHVIL-GSDWMHIDGEMFMPG-LPSAGGIMPINLLINGKGTY 259
Query: 232 -------TDGSKLFVLP---GYAYRLRIVNAVAIECPXXXXXXXXXXXXXXXXGKPVKGT 381
T + L V G +R R +NA + CP ++
Sbjct: 260 HDPKKNETTQTPLEVYTVRRGARFRFRFINAASHVCPLQLQIEDHMMEVIASDSFHLQPR 319
Query: 382 IARNLQLFPGERMDFVVRASAPSGGYWVRVRGEGACEGL 498
L GER DFV+ A+ YWVR+R G C L
Sbjct: 320 KVDTLVSTSGERYDFVLEANGVKDTYWVRLRSLGPCADL 358
Score = 26.6 bits (56), Expect = 0.53
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 14 FYHADSVSHHSDGVYGSLIV 73
FYH+ S H +G YG+LIV
Sbjct: 182 FYHSHSGHHKVNGHYGALIV 201
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 24.2 bits (50), Expect = 2.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -1
Query: 239 PSVAPFMTSEFGRSWFLSSK*PVISTANFAPMSRVCS 129
P VAP GR W PV + +S VCS
Sbjct: 541 PGVAPVPALATGRGWSSPQASPVSGYDSSTSISSVCS 577
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 6.6
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 494 PSHAPSPRTLTQ*PPLGADARTTKSIRSPGKSCKFRAIVPFTGFPSVLITT 342
P+H P T +Q P ++ T + IR+ G+S K R + G P+ + T
Sbjct: 387 PTHQP---TTSQENP---ESVTDEEIRNIGRSLKSRKVPGPDGIPNAALAT 431
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,485
Number of Sequences: 2352
Number of extensions: 13326
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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