Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H10
         (545 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10333-1|AAA59950.1|  776|Homo sapiens nueroendocrine-specific p...    30   6.1  
BC090862-1|AAH90862.1|  776|Homo sapiens reticulon 1 protein.          30   6.1  
BC034673-1|AAH34673.1| 1332|Homo sapiens misshapen-like kinase 1...    30   6.1  
AY775058-1|AAV41830.1| 1312|Homo sapiens misshapen/NIKs-related ...    30   6.1  
AB209450-1|BAD92687.1|  843|Homo sapiens misshapen/NIK-related k...    30   6.1  
AB041926-1|BAA94838.1| 1303|Homo sapiens GCK family kinase MINK-...    30   6.1  
AB035698-1|BAA90753.1| 1295|Homo sapiens Misshapen/NIK-related k...    30   6.1  

>L10333-1|AAA59950.1|  776|Homo sapiens nueroendocrine-specific
           protein A protein.
          Length = 776

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 406 PGERMDFVVRASAPSGGYWVRVRGEGACEGLTTK 507
           PG+  D ++  + P G  W+R RGEG  E +T K
Sbjct: 4   PGDPQDELLPLAGP-GSQWLRHRGEGENEAVTPK 36


>BC090862-1|AAH90862.1|  776|Homo sapiens reticulon 1 protein.
          Length = 776

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 406 PGERMDFVVRASAPSGGYWVRVRGEGACEGLTTK 507
           PG+  D ++  + P G  W+R RGEG  E +T K
Sbjct: 4   PGDPQDELLPLAGP-GSQWLRHRGEGENEAVTPK 36


>BC034673-1|AAH34673.1| 1332|Homo sapiens misshapen-like kinase 1
            (zebrafish) protein.
          Length = 1332

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -1

Query: 521  YMSIAFVVNPSHAPSPRTLTQ*PPL---GADARTTKSIRSPGKS 399
            Y ++  VV PSH+P+  +  Q PP      D ++   +++PGKS
Sbjct: 906  YTNLPDVVQPSHSPTENSKGQSPPSKDGSGDYQSRGLVKAPGKS 949


>AY775058-1|AAV41830.1| 1312|Homo sapiens misshapen/NIKs-related
            kinase isoform beta protein.
          Length = 1312

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -1

Query: 521  YMSIAFVVNPSHAPSPRTLTQ*PPL---GADARTTKSIRSPGKS 399
            Y ++  VV PSH+P+  +  Q PP      D ++   +++PGKS
Sbjct: 886  YTNLPDVVQPSHSPTENSKGQSPPSKDGSGDYQSRGLVKAPGKS 929


>AB209450-1|BAD92687.1|  843|Homo sapiens misshapen/NIK-related
           kinase isoform 2 variant protein.
          Length = 843

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -1

Query: 521 YMSIAFVVNPSHAPSPRTLTQ*PPL---GADARTTKSIRSPGKS 399
           Y ++  VV PSH+P+  +  Q PP      D ++   +++PGKS
Sbjct: 417 YTNLPDVVQPSHSPTENSKGQSPPSKDGSGDYQSRGLVKAPGKS 460


>AB041926-1|BAA94838.1| 1303|Homo sapiens GCK family kinase MINK-2
            protein.
          Length = 1303

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -1

Query: 521  YMSIAFVVNPSHAPSPRTLTQ*PPL---GADARTTKSIRSPGKS 399
            Y ++  VV PSH+P+  +  Q PP      D ++   +++PGKS
Sbjct: 877  YTNLPDVVQPSHSPTENSKGQSPPSKDGSGDYQSRGLVKAPGKS 920


>AB035698-1|BAA90753.1| 1295|Homo sapiens Misshapen/NIK-related kinase
            MINK-1 protein.
          Length = 1295

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -1

Query: 521  YMSIAFVVNPSHAPSPRTLTQ*PPL---GADARTTKSIRSPGKS 399
            Y ++  VV PSH+P+  +  Q PP      D ++   +++PGKS
Sbjct: 869  YTNLPDVVQPSHSPTENSKGQSPPSKDGSGDYQSRGLVKAPGKS 912


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,108,501
Number of Sequences: 237096
Number of extensions: 1790508
Number of successful extensions: 7798
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7798
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)