Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H09
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.57 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   3.0  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   4.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   5.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.2  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 397 VDSVLDVVRKEAESCDCLQG 456
           +DS+++++R   ++CD L G
Sbjct: 106 IDSIINIIRVRVDACDRLWG 125


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 419 FARKQSHVIVYKDSNSHTP 475
           FA   SH I+Y  +  H P
Sbjct: 254 FAGLHSHTIIYLSAKGHRP 272


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -1

Query: 166 WVDA-CHRRVPRT*SIWFPHCPLDVHDFPHFDISELNKLLNTNIF 35
           WV   CH  +     I  P C  +V D    D+  L KL  T+ F
Sbjct: 9   WVGGFCHSIIQIPVIIQLPFCGPNVIDHYFRDLQPLFKLACTDTF 53


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 219 SCNNMMRSSEVESPWKH 169
           S NN+  S +V   WKH
Sbjct: 29  SANNLAHSMKVIYEWKH 45


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 369 GTLHGRC*ASRFRLRRSS 422
           GTL+GRC      L RS+
Sbjct: 551 GTLYGRCKREGIELSRSN 568


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 234 LPPEASCNNMMRSSEVE 184
           LPP   C  ++ S E+E
Sbjct: 464 LPPRKRCKMILESMEIE 480


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 348 AGLSENEVVGAEDLSE 301
           AGL+E EVV A+ ++E
Sbjct: 62  AGLTEEEVVLAKTIAE 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,447
Number of Sequences: 438
Number of extensions: 2360
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)