Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H07
(386 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 24 0.70
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 2.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 2.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 3.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 3.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 3.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 4.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 4.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 4.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 4.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 4.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 4.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 4.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 4.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 4.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 4.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 4.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 6.5
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = +1
Query: 148 PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 246
P C C H + CP+G ++ N K
Sbjct: 76 PICGACGDIAHTVKYCPKGTKNPGTLATVNAFK 108
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 2.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD ST+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSSTSNTSKT 99
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +1
Query: 232 YNCNKSVAXISRNLAPNGTKTCYVCGK 312
+ C+K + +R TC +CGK
Sbjct: 213 FTCSKQLKVHTRTHTGEKPYTCDICGK 239
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 3.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 61 VHRPGTARDAESTATCNGTGHIRVMPNPT 147
VH P + TAT + ++V P+PT
Sbjct: 1363 VHAPPHSPQITLTATTTNSLTMKVRPHPT 1391
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 3.7
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGTGHIRVMPNPTPSCYNCNKT 174
RIR + G S R +RD +T + T ++ N P N T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNT---SNTSKTVILSNKGPEGIQINAT 115
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 3.7
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGTGHIRVMPNPTPSCYNCNKT 174
RIR + G S R +RD +T + T ++ N P N T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNT---SNTSKTIILSNKGPEGIQINAT 115
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDKSNTSNTSKT 99
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNTSNISKT 99
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.9
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 76 TARDAESTATC--NGTGHIRVMPNPTPSCYNCNKTGHIARNCPEGGRDNSNQ 225
T R + +C +G G + +P S ++ +A CP+GGR N+
Sbjct: 572 TYRGGKGALSCLLDGKGDVAFVPLTALSEEGV-QSKDLALICPDGGRAEINE 622
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.9
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 76 TARDAESTATC--NGTGHIRVMPNPTPSCYNCNKTGHIARNCPEGGRDNSNQ 225
T R + +C +G G + +P S ++ +A CP+GGR N+
Sbjct: 572 TYRGGKGALSCLLDGKGDVAFVPLTALSEEGV-QSKDLALICPDGGRAEINE 622
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.9
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 76 TARDAESTATC--NGTGHIRVMPNPTPSCYNCNKTGHIARNCPEGGRDNSNQ 225
T R + +C +G G + +P S ++ +A CP+GGR N+
Sbjct: 572 TYRGGKGALSCLLDGKGDVAFVPLTALSEEGV-QSKDLALICPDGGRAEINE 622
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 6.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 22 RIRRLASTGGNASVHRPGTARDAESTATCNGT 117
RIR + G S R +RD +T+ + T
Sbjct: 68 RIREIEKLGSERSKSRSPGSRDRSNTSNTSKT 99
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,927
Number of Sequences: 438
Number of extensions: 2141
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9391092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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