Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H04
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    24   4.4  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   4.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   7.6  

>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 349 KKGTPVGWFPDTFTFLFCGS 290
           K G P G F DTF   F GS
Sbjct: 133 KSGNPFGPFWDTFEVEFAGS 152


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 58  FIYFLKKKDKHSEATS*LYYYSKNASN 138
           F+YFLKKK   SEA   ++ Y K   N
Sbjct: 373 FVYFLKKK---SEAEDKIHEYVKLVQN 396


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 371 SNNDAPVDSMGCHMSMDENAPPQVYRYQSLISLMLSSQTKDQVTFAAMERLRAR 532
           +N  AP+D +      DE   P V + QS     LSS      T AA+ + +++
Sbjct: 36  TNTTAPLDEVDGEEEEDEEEGPGVRQKQSSPPARLSSSASS--TAAALLKTKSK 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,297
Number of Sequences: 2352
Number of extensions: 11741
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)