Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H02
         (471 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z4M7 Cluster: Putative uncharacterized protein; n=2; ...    34   1.8  
UniRef50_Q4Y026 Cluster: Putative uncharacterized protein; n=5; ...    32   5.5  
UniRef50_A2A0C3 Cluster: Putative membrane protein; n=1; Microsc...    32   7.3  

>UniRef50_Q4Z4M7 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 418

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = -1

Query: 264 YIYLLFNLKYFYVPSY--YLYFTKRSMLILINLVYIHCKTLTI*DFFIYIFML 112
           Y ++LF L  F  PSY  ++YFT +  ++LI  V+I+   L + D +++I+ML
Sbjct: 229 YSFVLFILS-FSPPSYDVFVYFTPQKDILLILCVFIYEIHLFLSDSYMFIYML 280


>UniRef50_Q4Y026 Cluster: Putative uncharacterized protein; n=5;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium chabaudi
          Length = 1235

 Score = 32.3 bits (70), Expect = 5.5
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 211  VFYKTINVNTNQSCIYTLQNIDNLRFFYLYFYVMMKKIKYLAI 83
            +F   +N+N N   +YT Q +  +  F+ YFY M +  KYL I
Sbjct: 1029 IFLHILNINNNIDKLYTYQTMQLI--FHPYFYWMYQIYKYLKI 1069


>UniRef50_A2A0C3 Cluster: Putative membrane protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative membrane
           protein - Microscilla marina ATCC 23134
          Length = 226

 Score = 31.9 bits (69), Expect = 7.3
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -3

Query: 244 FEIFLCSELLLVFYKTINVNTNQSCIYTLQNIDNLRFFYLYFYVMMKKIKYL 89
           F +FLCS L+L+F        +++ + T+  + N+ F ++ F     KIK L
Sbjct: 23  FSVFLCSFLVLIFGDLFLPMQDKNLVQTILLVQNIAFSFILFIREPIKIKRL 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,113,797
Number of Sequences: 1657284
Number of extensions: 5626807
Number of successful extensions: 12559
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12520
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)