Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H02
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine r... 31 0.42
AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical ... 31 0.55
AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine re... 30 0.73
AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine re... 30 0.73
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 29 1.7
AF024503-11|AAG24091.2| 325|Caenorhabditis elegans Serpentine r... 28 2.9
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d... 28 3.9
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase... 28 3.9
Z83128-6|CAB05638.2| 353|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF024503-12|AAG24092.2| 329|Caenorhabditis elegans Serpentine r... 27 9.0
>AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine
receptor, class t protein7 protein.
Length = 353
Score = 31.1 bits (67), Expect = 0.42
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 267 IYIYLLFNL--KYFYVPSYYLYFTKRSMLI-LINLVYIHCKTLTI*DFFIYIF 118
+Y+YL +NL K+ Y S +LY TKR ++ + L H I +F ++ +
Sbjct: 213 LYLYLSYNLLFKFGYSTSIWLYKTKRQIIFQAVILCAFHAVVAGIYEFMMFFY 265
>AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical
protein C23H5.7 protein.
Length = 644
Score = 30.7 bits (66), Expect = 0.55
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYF-TKRSMLILINLVYIHCKT 151
+Y Y+ FN KY+Y+ S+++ F +M ++ ++ KT
Sbjct: 37 LYFYVPFNSKYYYIWSFFVSFGVMYNMFAMVIFIFADIKT 76
>AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine
receptor, class t protein1 protein.
Length = 346
Score = 30.3 bits (65), Expect = 0.73
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -1
Query: 273 TKIYIYLLFNL--KYFYVPSYYLYFTKRSMLIL-INLVYIHCKTLTI*DFFIYIF 118
T +Y YL + L KY Y S +LY +KR +++ + + + H T I +F + +
Sbjct: 213 TFLYFYLCYYLIFKYGYSTSMWLYKSKRQIILQGVIICFFHAGTAIIYEFVQFFY 267
>AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine
receptor, class t protein2 protein.
Length = 346
Score = 30.3 bits (65), Expect = 0.73
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -1
Query: 273 TKIYIYLLFNL--KYFYVPSYYLYFTKRSMLIL-INLVYIHCKTLTI*DFFIYIF 118
T +Y YL + L KY Y S +LY +KR +++ + + + H T I +F + +
Sbjct: 213 TFLYFYLCYYLIFKYGYSTSMWLYKSKRQIILQGVIICFFHAGTAIIYEFVQFFY 267
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L N F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 59 IYIFLKMNNSIFDLPVIYIFLKMSNSIFKLPVIYIFLKMSNSIFDLPVIYIFL 111
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L N F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 299 IYIFLKMNNSIFDLPVIYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 351
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L N F +P Y++ + + + ++YI K +I D IYIF+
Sbjct: 27 IYIFLKMNNSIFDLPVIYIFLKMNNSIFDLPVIYIFLKMNNSIFDLPVIYIFL 79
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L N F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 155 IYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 207
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L N F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 315 IYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 367
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L N F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 557 IYIFLKMNNSIFDLPVIYIFLEMSNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 609
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L N F +P Y++ + + + ++YI K +I D IYIF+
Sbjct: 267 IYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIFLKMNNSIFDLPVIYIFL 319
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L N F +P Y++ + + + ++YI K +I D IYIF+
Sbjct: 525 IYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIFLKMNNSIFDLPVIYIFL 577
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L + F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 107 IYIFLKMSNSIFDLPVIYIFLKMSNSIFKLPVIYIFLKMSNSIFDLPVIYIFL 159
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L + F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 388 IYIFLKMSNSIFDLPVIYIFLKMSNSIFKLPVIYIFLKMSNSIFDLPVIYIFL 440
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L + F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 509 IYIFLKMSNSIFKLPVIYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 561
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK 154
IYI+L N F +P Y++ + + + ++YI K
Sbjct: 43 IYIFLKMNNSIFDLPVIYIFLKMNNSIFDLPVIYIFLK 80
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L + F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 75 IYIFLKMSNSIFKLPVIYIFLKMSNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 127
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L + F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 139 IYIFLKMSNSIFDLPVIYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 191
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L + F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 251 IYIFLKMSNSIFDLPVIYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 303
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L + F +P Y++ + + + ++YI K + +I D IYIF+
Sbjct: 404 IYIFLKMSNSIFKLPVIYIFLKMSNSIFDLPVIYIFLKMSNSIFDLPVIYIFL 456
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 267 IYIYLLFNLKYFYVPSYYLYFTKRSMLILINLVYIHCK-TLTI*DF-FIYIFM 115
IYI+L + F +P Y++ + + + ++YI K +I D IYIF+
Sbjct: 493 IYIFLKMSNSIFDLPVIYIFLKMSNSIFKLPVIYIFLKMNNSIFDLPVIYIFL 545
>AF024503-11|AAG24091.2| 325|Caenorhabditis elegans Serpentine
receptor, class u protein24 protein.
Length = 325
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 265 IYLPTF*FEIFLCSELLLVFYKTINVNTNQSCIYTLQNIDNLRFF 131
+Y+P +F LL+ YK NVN + TL ++ L FF
Sbjct: 37 LYIPATCVIVFRICSTLLIEYKNKNVNIQLFGVITLSHVMCLLFF 81
>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
protein 1 protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 240 KYFYVPSYYLYFTKRSMLILINLVYIHCKTLTI*DFFIYI 121
KY +V S Y + ++ LVYIHCK L + D + I
Sbjct: 1216 KYIHVGSLRTY-DQLGQKLVSELVYIHCKLLIVDDEHVII 1254
>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 240 KYFYVPSYYLYFTKRSMLILINLVYIHCKTLTI*DFFIYI 121
KY +V S Y + ++ LVYIHCK L + D + I
Sbjct: 1216 KYIHVGSLRTY-DQLGQKLVSELVYIHCKLLIVDDEHVII 1254
>Z83128-6|CAB05638.2| 353|Caenorhabditis elegans Hypothetical
protein W01D2.4 protein.
Length = 353
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 267 IYIYLLFNL--KYFYVPSYYLYFTKRSMLI-LINLVYIHCKTLTI*DF 133
+Y+YL + L K+ Y S +LY TKR ++ I+L H I ++
Sbjct: 215 LYLYLSYRLIFKFGYSTSMWLYKTKRQIIFQAISLCIFHATAAFIYEY 262
>AF024503-12|AAG24092.2| 329|Caenorhabditis elegans Serpentine
receptor, class u protein25 protein.
Length = 329
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 88 LNILSFSS*HKNINKKILNCQCFAVYIY 171
LN++ F S H+ IN+ IL V+IY
Sbjct: 136 LNLIVFPSQHRKINETILKISIPIVFIY 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,242,016
Number of Sequences: 27780
Number of extensions: 146078
Number of successful extensions: 306
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -