Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_G20
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 64 5e-11
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 64 5e-11
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 64 5e-11
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 64 5e-11
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 64 5e-11
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 60 5e-10
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 60 5e-10
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 58 3e-09
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 39 0.001
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 37 0.007
Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical pr... 35 0.021
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 34 0.037
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 34 0.037
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 33 0.11
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 1.1
U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 27 4.3
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 27 4.3
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 4.3
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 27 4.3
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 27 4.3
AC006695-8|AAF39976.1| 351|Caenorhabditis elegans Hypothetical ... 27 4.3
U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical pr... 27 5.6
AF000266-5|AAC71172.1| 370|Caenorhabditis elegans Hypothetical ... 27 5.6
AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical ... 27 5.6
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z48809-5|CAE17927.1| 205|Caenorhabditis elegans Hypothetical pr... 26 9.8
AF039034-1|AAB94161.2| 423|Caenorhabditis elegans Hypothetical ... 26 9.8
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri... 26 9.8
AC084197-37|AAG23463.1| 422|Caenorhabditis elegans Hypothetical... 26 9.8
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ... 26 9.8
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 63.7 bits (148), Expect = 5e-11
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 FSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRER 423
F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE+
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREK 75
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 63.7 bits (148), Expect = 5e-11
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 FSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRER 423
F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE+
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREK 75
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 63.7 bits (148), Expect = 5e-11
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 FSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRER 423
F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE+
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREK 75
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 63.7 bits (148), Expect = 5e-11
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 FSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRER 423
F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE+
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREK 75
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 63.7 bits (148), Expect = 5e-11
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 FSVEKVLDRRI-KNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKRER 423
F VEKVLD+R K G+ E+L++W+G+ D++WEP +NL C E++ +E KRE+
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREK 75
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 60.5 bits (140), Expect = 5e-10
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +1
Query: 256 FSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKR 417
F VEKVL++R+ G EY +KW+G+ + +WEP +NL C +I YE+ KR
Sbjct: 37 FVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEKEAAKR 90
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 60.5 bits (140), Expect = 5e-10
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +1
Query: 256 FSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLKR 417
F VEKVL++R+ G EY +KW+G+ + +WEP +NL C +I YE+ KR
Sbjct: 37 FVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEKEAAKR 90
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 57.6 bits (133), Expect = 3e-09
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +1
Query: 250 EEFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAY--EEARLKRE 420
E ++VE +L+ R K GK E+ +KW GY + N+WEP++N+ P LI A+ EA K E
Sbjct: 6 ELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAARKAE 64
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 250 EEFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNL-DCPELISAYEEARLK 414
E F VEK+L ++ + + ++W GY +++TWEPE++L +C + A +LK
Sbjct: 22 EIFEVEKILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDLQECASEVVAEYYKKLK 77
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 43.6 bits (98), Expect = 6e-05
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 253 EFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLD-CPEL 384
+FS V + ++ K YL+ W+GY ++ TWEPE+NL+ C EL
Sbjct: 33 KFSPASVEYDKRRHSKYAYLVHWRGYDWKERTWEPEENLENCEEL 77
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +1
Query: 253 EFSVEKVLDRRIKNGKVEYLLKWKGYSN---EDNTWEPEDNLDCPELISAYEE 402
E++VE+VL R G YL++WKGY + WE ED +C +L++AY++
Sbjct: 86 EYAVERVLAHRKVKGSPLYLVQWKGYPHPVWNSEMWE-EDLDNCKDLLAAYKK 137
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 307 YLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARL 411
+L+KW GY N++ TWEPE N+ P+ + YE +L
Sbjct: 95 FLVKWLGYGNKEMTWEPESNI--PDSVYLYEYKKL 127
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +1
Query: 250 EEFSVEKVLDRRI--KNGKVEYLLKWKGYSN---EDNTWEPEDNLDCPELISAYEEA 405
E+F+VEK++ R K K +L+ W+GY N WE E + +C +L+ AY+++
Sbjct: 113 EDFAVEKIIAHRFSGKKNKPLFLVMWRGYPNPVSHSEMWENELS-NCKDLLEAYKDS 168
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 36.7 bits (81), Expect = 0.007
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Frame = +1
Query: 139 SYSQNNRPDQLWKLSD*SDYA----ATQGTXPDXXKXWXXPEEFSVEKVLDRRIKNGKV- 303
+Y + + ++WK S +Y Q + + + E + R +G +
Sbjct: 272 NYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMA 331
Query: 304 -EYLLKWKGYSNEDNTWEPEDNLDCPELISAY 396
EYL+KW G D TWE ++ + PE I AY
Sbjct: 332 TEYLIKWSGLPYSDCTWE-DEKMVAPEQIKAY 362
Score = 31.1 bits (67), Expect = 0.35
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 304 EYLLKWKGYSNEDNTWEPEDNL 369
++ +KW G+S+ NTWE E++L
Sbjct: 238 QFFVKWTGWSHLHNTWESENSL 259
>Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical
protein C15H11.5 protein.
Length = 503
Score = 35.1 bits (77), Expect = 0.021
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 250 EEFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 414
E + V+ ++ RI+ +++Y +KW ++ D T E E L C E + Y LK
Sbjct: 43 EFYEVQDIVRSRIEGREIQYTVKWTNWNGGD-TEEAERRLVCTEKLMGYAARTLK 96
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 34.3 bits (75), Expect = 0.037
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 247 PEEFSVEKVLDRR-IKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 414
PE + ++++ + + +YL+KWK S + TWE +D+ I+ YEEA +K
Sbjct: 486 PEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDS-----NIANYEEAIIK 537
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 34.3 bits (75), Expect = 0.037
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 247 PEEFSVEKVLDRR-IKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 414
PE + ++++ + + +YL+KWK S + TWE +D+ I+ YEEA +K
Sbjct: 486 PEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDS-----NIANYEEAIIK 537
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 247 PEEFSVEKVLDR-RIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 414
PE + ++++ + +YL+KWK S E TWE D+ D I+ YE+A +K
Sbjct: 498 PEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE-RDDTD----IANYEDAIIK 549
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 247 PEEFSVEKVLDR-RIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 414
PE + ++++ + +YL+KWK S E TWE D+ D I+ YE+A +K
Sbjct: 498 PEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE-RDDTD----IANYEDAIIK 549
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 247 PEEFSVEKVLDR-RIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYEEARLK 414
PE + ++++ + +YL+KWK S E TWE D+ D I+ YE+A +K
Sbjct: 498 PEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE-RDDTD----IANYEDAIIK 549
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 262 VEKVLDRRIKNGKVEY-LLKWKGYSNEDNTWEP 357
V++V+D ++ E+ L+KWK E+ TWEP
Sbjct: 1106 VDRVVDLITEDDGQEFVLIKWKSLGYEEVTWEP 1138
>U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical
protein F32E10.1 protein.
Length = 754
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 KLSD*SDYAATQGTXPDXXKXWXXPEEFSVEKVLDRRIKNGKVEYLLKWKG-YSNEDNTW 351
K S SD AAT D K E+F V++ ++ +KN + +K KG E
Sbjct: 477 KKSKKSD-AATSLLADDRFKKLFESEDFEVDETSEQFLKNASIAQKMKAKGPVEVESEGE 535
Query: 352 EPEDN 366
E EDN
Sbjct: 536 ESEDN 540
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 381 LWTVKVIFWLPCIVFVGITF 322
LW V+VI ++ C++ +GI F
Sbjct: 367 LWDVRVIGFVTCVILMGIVF 386
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 381 LWTVKVIFWLPCIVFVGITF 322
LW V+VI ++ C++ +GI F
Sbjct: 367 LWDVRVIGFVTCVILMGIVF 386
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 317 NGKVIPTKTIHGSQKITLTVQS 382
NG +I ++ IHG + LTVQ+
Sbjct: 1220 NGNIIASEAIHGDESYALTVQA 1241
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 317 NGKVIPTKTIHGSQKITLTVQS 382
NG +I ++ IHG + LTVQ+
Sbjct: 1220 NGNIIASEAIHGDESYALTVQA 1241
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 317 NGKVIPTKTIHGSQKITLTVQS 382
NG +I ++ IHG + LTVQ+
Sbjct: 1220 NGNIIASEAIHGDESYALTVQA 1241
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 381 LWTVKVIFWLPCIVFVGITF 322
LW V+VI ++ C++ +GI F
Sbjct: 367 LWDVRVIGFVTCVILMGIVF 386
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 381 LWTVKVIFWLPCIVFVGITF 322
LW V+VI ++ C++ +GI F
Sbjct: 367 LWDVRVIGFVTCVILMGIVF 386
>AC006695-8|AAF39976.1| 351|Caenorhabditis elegans Hypothetical
protein W06H8.4 protein.
Length = 351
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 220 PDXXKXWXXPEEFSVEKVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDN 366
PD K E K ++ ++ EY+L W GY +D+ E +D+
Sbjct: 297 PDQIKNILEIVERKAWKEEEKSMRKSGFEYVLNWFGYMVDDSEDEKDDD 345
>U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical
protein F32E10.5 protein.
Length = 549
Score = 27.1 bits (57), Expect = 5.6
Identities = 24/94 (25%), Positives = 39/94 (41%)
Frame = +1
Query: 115 ESLAQSDLSYSQNNRPDQLWKLSD*SDYAATQGTXPDXXKXWXXPEEFSVEKVLDRRIKN 294
+S A SD + D W + DYA + P +EF VE++ + RI
Sbjct: 283 DSGADSDFLEDEEEE-DAGWDYGEGDDYAYLRSFPPACKIFRMSEDEFMVERIENERIIY 341
Query: 295 GKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAY 396
+ +L+ + + E T E E P++ AY
Sbjct: 342 LTSKDMLERRREAEEYLTKEKESLESLPDVWMAY 375
>AF000266-5|AAC71172.1| 370|Caenorhabditis elegans Hypothetical
protein W08F4.8a protein.
Length = 370
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 316 KWKGYSNEDNTWEPEDNLDCPELISAYEEARLKR 417
KWK D+ + N+D P L +ARL+R
Sbjct: 7 KWKDIEVSDDEDDTHPNIDTPSLFRWRHQARLER 40
>AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical
protein W08F4.8b protein.
Length = 403
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 316 KWKGYSNEDNTWEPEDNLDCPELISAYEEARLKR 417
KWK D+ + N+D P L +ARL+R
Sbjct: 40 KWKDIEVSDDEDDTHPNIDTPSLFRWRHQARLER 73
>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
protein ZK455.2 protein.
Length = 1118
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 286 IKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPELISAYE 399
IKN + +++ W + N+ WE N+D E+ A+E
Sbjct: 284 IKNEEFVFVIPWLAHQNDHYPWEAA-NVDKQEVKLAFE 320
>Z48809-5|CAE17927.1| 205|Caenorhabditis elegans Hypothetical
protein T01E8.8 protein.
Length = 205
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 268 KVLDRRIKNGKVEYLLKWKGYSNEDNTWEPEDNLDCPEL 384
K+L+RR++ +L G+ D W P+D C L
Sbjct: 77 KMLERRVRLHSYTCILGEGGFCTLDKFWFPDDKEGCTYL 115
>AF039034-1|AAB94161.2| 423|Caenorhabditis elegans Hypothetical
protein H22D07.1 protein.
Length = 423
Score = 26.2 bits (55), Expect = 9.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 363 IFWLPCIVFVG 331
+FW+PCIV +G
Sbjct: 239 VFWIPCIVIIG 249
>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
protein 2 protein.
Length = 1262
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 343 NTWEPEDNLDCPELISAYEEA 405
N P+DN +CPE YE A
Sbjct: 412 NPTNPKDNRECPENAEEYERA 432
>AC084197-37|AAG23463.1| 422|Caenorhabditis elegans Hypothetical
protein Y73B6BL.25 protein.
Length = 422
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 322 KGYSNEDNTWEPEDNLDCPEL 384
K D W+P DN D PEL
Sbjct: 155 KSCKKSDEVWKPVDNDDLPEL 175
>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
protein.
Length = 1262
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 343 NTWEPEDNLDCPELISAYEEA 405
N P+DN +CPE YE A
Sbjct: 412 NPTNPKDNRECPENAEEYERA 432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,771,767
Number of Sequences: 27780
Number of extensions: 155993
Number of successful extensions: 443
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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