Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_G18
(444 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0745 + 27716622-27717017 33 0.078
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 30 0.96
07_01_0040 + 325737-328181 29 1.7
09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-23... 29 2.2
05_05_0080 - 22243175-22243226,22243342-22243389,22243485-222435... 29 2.2
04_04_0744 + 27713422-27713814 29 2.2
03_05_1032 - 29861859-29862011,29862347-29862470,29862557-298627... 29 2.2
04_03_0573 + 17329365-17330440,17330505-17331201 28 2.9
03_01_0022 + 189525-189551,189600-189950 28 2.9
01_07_0025 + 40565296-40565497,40565591-40566075 28 2.9
10_08_0432 - 17875427-17875807,17877810-17879099 28 3.9
07_01_0282 - 2070027-2070041,2074763-2075062,2075154-2075722,207... 28 3.9
04_04_1624 - 34849385-34849410,34849748-34851052,34852121-348522... 28 3.9
09_03_0137 + 12667763-12667930,12668715-12668779,12668879-126689... 27 5.1
05_01_0538 + 4646772-4647059,4647462-4647542,4647819-4647890,464... 27 5.1
04_03_0744 + 19237901-19237912,19238119-19238611,19238860-192389... 27 5.1
02_03_0344 + 17967687-17968309,17968402-17968744,17970285-179704... 27 5.1
02_03_0343 + 17961977-17962596,17962670-17963015,17965933-179662... 27 5.1
02_02_0616 - 12160899-12161506,12161698-12161821,12161974-121620... 27 5.1
11_06_0219 + 21367719-21367896,21369453-21369592,21369809-213699... 27 6.8
10_02_0042 + 4493692-4494019,4494428-4494441 27 6.8
03_05_0851 + 28225608-28226570 27 6.8
03_04_0091 + 17241555-17241602,17241685-17241822,17241901-172421... 27 6.8
02_05_0625 + 30453521-30453890,30454215-30454352,30454458-304547... 27 6.8
11_02_0043 - 7690506-7691726 27 9.0
08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766 27 9.0
08_02_0445 + 17218136-17218333,17219595-17219725,17219908-17220112 27 9.0
05_07_0364 - 29611149-29611211,29611441-29611623,29611796-296118... 27 9.0
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498... 27 9.0
04_04_0534 + 26071227-26071811 27 9.0
02_02_0097 - 6746934-6747005,6747372-6748325,6748421-6748435,674... 27 9.0
02_01_0384 - 2781362-2782299,2782320-2782428 27 9.0
01_07_0291 + 42555233-42555444,42556515-42556550,42556652-425567... 27 9.0
01_07_0233 + 42191465-42191953,42191976-42192272,42192310-42192690 27 9.0
01_05_0536 - 23011618-23011635,23011871-23012052,23012160-230123... 27 9.0
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962 27 9.0
>04_04_0745 + 27716622-27717017
Length = 131
Score = 33.5 bits (73), Expect = 0.078
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 143 HTAHPTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 316
H PTPPT P + R+ L+ G C+N + +++A+ P PL G
Sbjct: 27 HCPTPTPPTPSTPTPTPAAFGKCPRDALKLGVCANVLGLIKAKVGVPPAEPCCPLLEG 84
>04_04_0962 + 29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 29.9 bits (64), Expect = 0.96
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 70 VSIDR-LKPAYLLSESPTLQGATKPPHSAPDSTYVTRSGRRVRFQD 204
+S++R L+ L SE+PT+ +KPP + P+ ++ S VR+ +
Sbjct: 899 ISVERILQYTKLPSEAPTITEGSKPPMAWPEFGMISISNLEVRYAE 944
>07_01_0040 + 325737-328181
Length = 814
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 222 VSGGAGVATRSSSSAPAHLIRGVG 293
+SGG G ++ SSSS+ +HL GVG
Sbjct: 74 ISGGNGSSSSSSSSSISHLSAGVG 97
>09_01_0008 -
233137-233279,233712-233827,235376-235720,236218-236292,
236508-236636,237516-237589,237836-237968,239366-239584,
239671-239756,239843-241107,241304-241640,242548-242862,
243614-243697,243776-243883,243981-244079
Length = 1175
Score = 28.7 bits (61), Expect = 2.2
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = -1
Query: 384 DIYIYVIDERARGLPLSWAVRDWP--RGKGRLARHLG*DARARTTMI---VLLHQPPRRP 220
D +I ++ L W + W RGK R +G A + I + +HQ PR P
Sbjct: 7 DRFIEMVSAGTLYLSGEWERKYWSCSRGKDRYPYPVGYHAVRHFSGISYTMQIHQGPRGP 66
Query: 219 LRSIKVLEPDSSTG 178
L + + DSSTG
Sbjct: 67 LFQVTSTQGDSSTG 80
>05_05_0080 -
22243175-22243226,22243342-22243389,22243485-22243540,
22243752-22243819,22244712-22244773,22245166-22245214,
22245818-22245899,22245987-22246064,22246441-22246499,
22246727-22246805,22246946-22247218
Length = 301
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 267 ARTTMIVLLHQPPRRPLRSIKVLEPDSSTGSRDVGGVG 154
A ++ L+ + PR PL + + PD++TG+R G
Sbjct: 51 ATAPILRLVQRRPRAPLTAARAASPDAATGARSPSSGG 88
>04_04_0744 + 27713422-27713814
Length = 130
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 155 PTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 316
PTP T P + R+ L+ G C+N + +++A+ P PL G
Sbjct: 31 PTPSTPSTPTPTPAAFGKCPRDALKLGVCANVLGLIKAKVGVPPAEPCCPLLEG 84
>03_05_1032 -
29861859-29862011,29862347-29862470,29862557-29862759,
29863081-29863199,29863489-29863623,29863695-29863950,
29864749-29864880,29865001-29865222
Length = 447
Score = 28.7 bits (61), Expect = 2.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -1
Query: 159 VGCAVWRLRGSLQRRGLAE*ISRLKSVDGNSNNFTSYIYLKNFIAPADNLI 7
VGC RL G LQ GL + L SVDG ++ S +N + NL+
Sbjct: 362 VGCEKCRLWGKLQVLGLGTALKILFSVDGENHLNQSLQLQRNEVIALVNLL 412
>04_03_0573 + 17329365-17330440,17330505-17331201
Length = 590
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 343 SAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVD 209
+A+ G ++ R S PR+ C G +D ++T V VD
Sbjct: 83 AAVAAGRKVKVATRYSNSFPRLACPGGEDGTVISTRWLDRAVRVD 127
>03_01_0022 + 189525-189551,189600-189950
Length = 125
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 155 PTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 316
PTPP + P SG + L+ G C+N + +++ + P PL G
Sbjct: 23 PTPPVTPPPSPPSGGGNKCPIDALKLGVCANVLNLLKLKVGVPASEECCPLLGG 76
>01_07_0025 + 40565296-40565497,40565591-40566075
Length = 228
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 301 SSRPTPRMRCAGADDDDRVATPA 233
S R PR R A ADDDD ++P+
Sbjct: 179 SIRGAPRRRAAAADDDDMPSSPS 201
>10_08_0432 - 17875427-17875807,17877810-17879099
Length = 556
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 319 LATRQRSSRPTPRMRCAGADDDDRVATP 236
+ +RSS P P + GAD+DD V P
Sbjct: 374 IVAARRSSPPAPAVAANGADEDDLVFHP 401
>07_01_0282 -
2070027-2070041,2074763-2075062,2075154-2075722,
2075812-2076337
Length = 469
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 334 VGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPP 227
VG + +QRS P+ R A A D D P PP
Sbjct: 395 VGNMQQQQQQRSMTPSASSRAAAATDADGEDPPPPP 430
>04_04_1624 -
34849385-34849410,34849748-34851052,34852121-34852294,
34852386-34852456,34852563-34852618,34853047-34853185,
34853310-34853695,34853801-34853851,34853936-34854021,
34854112-34854553,34856241-34856315,34856457-34856593,
34856679-34856838,34856917-34857012,34857093-34857247,
34857900-34858032
Length = 1163
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 194 LTLLPDR-VT*VESGALCGGFVAPCSVGDSLSK*AGLSLSMETV 66
+T LPDR V+ S LC G +APCS + L S ++
Sbjct: 254 MTSLPDRGVSSSSSDPLCEGNIAPCSSSSEQKEDCSLKQSKTSI 297
>09_03_0137 +
12667763-12667930,12668715-12668779,12668879-12668954,
12669142-12669339,12669716-12669795,12670670-12670913,
12671061-12671162,12671243-12671305,12671550-12671627,
12671905-12671967,12672163-12672209,12672328-12672496
Length = 450
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 310 RQRSSRPTPRMRCAGADDDDRVATPAPPETVTVDKSPGT*LFYRIA 173
R+ SSR + R D DD + PAP V K G ++YR A
Sbjct: 7 RRPSSRTSSTAR--PVDGDDVIEAPAPRPVAGVKKHIGLHVYYRFA 50
>05_01_0538 +
4646772-4647059,4647462-4647542,4647819-4647890,
4648458-4649321
Length = 434
Score = 27.5 bits (58), Expect = 5.1
Identities = 30/91 (32%), Positives = 34/91 (37%)
Frame = +2
Query: 101 YSASPRRCKEPRSLHTAHPTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASH 280
+ AS R R T H S P SGSR DR+ S R+SH
Sbjct: 214 HRASTRESSPVRRTVT-HDGHRKSSSPSRRSGSREVPDRDRSSRDRSSRDY----DRSSH 268
Query: 281 PRCRARRPLPRGQSRTAHDSGRPRARSSITY 373
R R R R +HD R R RSS Y
Sbjct: 269 DRDRDHSS--RDYDRPSHDRDRDRDRSSRDY 297
>04_03_0744 +
19237901-19237912,19238119-19238611,19238860-19238928,
19239124-19239140,19239260-19239357,19240019-19240156,
19240710-19240899,19241175-19241307,19241505-19242442
Length = 695
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 248 TIIVVRARASHPRCRARRPLPR 313
T I+ RAR H RCR RRP R
Sbjct: 19 TKILSRARQIHRRCRRRRPRRR 40
>02_03_0344 +
17967687-17968309,17968402-17968744,17970285-17970410,
17970458-17970642,17970721-17970973
Length = 509
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 171 DVGGVGCAVWRLRGSLQR 118
DVGGVG +WRLR S R
Sbjct: 249 DVGGVGRRLWRLRESRTR 266
>02_03_0343 +
17961977-17962596,17962670-17963015,17965933-17966291,
17966384-17966636
Length = 525
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 171 DVGGVGCAVWRLRGSLQR 118
DVGGVG +WRLR S R
Sbjct: 248 DVGGVGRRLWRLRESRTR 265
>02_02_0616 -
12160899-12161506,12161698-12161821,12161974-12162083,
12162119-12162271,12162545-12162779
Length = 409
Score = 27.5 bits (58), Expect = 5.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 169 VTRSGRRVRFQDFYRP 216
+T+ GRR+ F+DF RP
Sbjct: 323 ITKDGRRIEFRDFTRP 338
>11_06_0219 +
21367719-21367896,21369453-21369592,21369809-21369901,
21370262-21370323,21370885-21370991,21372348-21372437,
21372521-21372561
Length = 236
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 31 KIFQIDIAGKIVTVSIDRLKPAYLLS 108
+IF +D +IVT +++R P+Y+L+
Sbjct: 80 RIFSLDKQSEIVTQALERALPSYILT 105
>10_02_0042 + 4493692-4494019,4494428-4494441
Length = 113
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 349 RPSAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPET 221
RP S ++++ ++P R A A ++RVA AP T
Sbjct: 3 RPKGGAAASSSSSKKPKAKPKQRGGAAAASGEERVAASAPSPT 45
>03_05_0851 + 28225608-28226570
Length = 320
Score = 27.1 bits (57), Expect = 6.8
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +2
Query: 107 ASPRRC----KEPRSLHTAHPTP-PTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRAR 271
A PRR K PR L AHP P SR E ++N +R ++ I V A
Sbjct: 158 AKPRRAAANPKPPRRLANAHPVPDKESRAKARERARERTKEKNRMRWVTLASAISVEAAT 217
Query: 272 AS 277
A+
Sbjct: 218 AA 219
>03_04_0091 +
17241555-17241602,17241685-17241822,17241901-17242198,
17242281-17242513,17242632-17242827,17242911-17243032,
17243100-17243165,17243373-17243436,17243851-17244176
Length = 496
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +2
Query: 125 KEPRSLHTAHPTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRP 304
+EPR + A P PP +D ++S + + L+ + V++ + P + +P
Sbjct: 213 EEPRKISVAAPPPPAQKDVTKKSYASITLTMIALQ-------VKVMKEVSLTPVVKP-KP 264
Query: 305 LPRGQSRTAHDSGRPRARSSIT 370
P+ +T S +P +SS T
Sbjct: 265 APKHVVKTVEASEKPSVKSSQT 286
>02_05_0625 +
30453521-30453890,30454215-30454352,30454458-30454727,
30454844-30454983,30455067-30455213,30455319-30456008
Length = 584
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 318 WPRGKGRLARHLG*DARARTTMIVLLHQPPRRPLRSIKV 202
W +GRL R G A T M + PR+P+ + KV
Sbjct: 47 WEGEEGRLRRAAGAARAAATEMWAFARKDPRKPVFAAKV 85
>11_02_0043 - 7690506-7691726
Length = 406
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 186 KSQVPGLLSTVTVSGGAGVATRSSSSA 266
K + LL ++ +GG G A+R+SSSA
Sbjct: 260 KDGLDALLRSLAAAGGGGKASRASSSA 286
>08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766
Length = 310
Score = 26.6 bits (56), Expect = 9.0
Identities = 23/88 (26%), Positives = 35/88 (39%)
Frame = +1
Query: 70 VSIDRLKPAYLLSESPTLQGATKPPHSAPDSTYVTRSGRRVRFQDFYRP*RSPGGLV*QH 249
+S+D PA L S GAT PP S ++Y + + R + + GG
Sbjct: 167 LSLDPSPPAKPLDSS---SGATAPPSSQAATSYASSAENIARLLEGWMRPGGGGGKTTTT 223
Query: 250 DHRRPRPRISSEVSGETTFAAWPVANRP 333
R +S +SGE + + A P
Sbjct: 224 PSSGSRSSAASVLSGEASHSGGATAPTP 251
>08_02_0445 + 17218136-17218333,17219595-17219725,17219908-17220112
Length = 177
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 349 RPSAIVGGS-RLATRQRSSRPTPRMRCAGADDDDRVATPAPPETV 218
R +A++GG R + R SS P+ A A + +PA P+TV
Sbjct: 14 RVAALLGGRVRASHRLLSSSPSSSSAAAAATERASPPSPADPDTV 58
>05_07_0364 - 29611149-29611211,29611441-29611623,29611796-29611853,
29612150-29612207,29612504-29612561,29612859-29612916,
29613214-29613271,29613568-29613625,29613923-29613980,
29614277-29614334,29614631-29614688,29614983-29615040,
29615337-29615394,29615691-29615748,29616045-29616102,
29616400-29616457,29616755-29616812,29617109-29617166,
29617463-29617520,29617817-29617874,29618171-29618228,
29618525-29618582,29618878-29618935,29619233-29619290,
29619942-29619999,29620297-29620376,29620649-29620706,
29621001-29621058,29621353-29621410,29621707-29621764,
29622415-29622472,29622767-29622824,29623121-29623164,
29623475-29623532,29623829-29623886,29624537-29624594,
29624889-29624946,29625243-29625300,29625597-29625654,
29626305-29626400,29626697-29626792,29627797-29627892,
29628188-29628283,29629996-29630053,29630350-29630407,
29630704-29630799,29631096-29631191,29632196-29632253,
29632549-29632644,29633648-29633743,29634040-29634042
Length = 1114
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 295 ETTFAAWPVANRPR*RKAARTLVD 366
ETT A+WP+ +RP RK VD
Sbjct: 1086 ETTAASWPMNHRPHPRKTGFGEVD 1109
>05_06_0203 +
26348360-26348458,26349584-26349645,26349808-26349895,
26349985-26350085,26350130-26350223,26350323-26350730,
26351090-26351521,26351612-26351755,26351824-26351940,
26352842-26352949
Length = 550
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 108 RVPDAARSHEASTQRTRLHLRHAIR*KSQVPGLLSTVTV 224
R+PD RSH+A+T T ++ + ++ P +T V
Sbjct: 264 RLPDPPRSHKATTSTTPAEIQKVVPPRAADPSSKTTTDV 302
>04_04_0534 + 26071227-26071811
Length = 194
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 328 GSRLATRQRSSRPTPRMR-CA 269
G+RLATR+R RP R R CA
Sbjct: 89 GARLATRRRGRRPARRRRDCA 109
>02_02_0097 -
6746934-6747005,6747372-6748325,6748421-6748435,
6748592-6748984
Length = 477
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -3
Query: 322 RLATRQRSSRPTPRMRCAGADDDDRVATPAPP 227
R A ++ R G DD+D A P PP
Sbjct: 389 RAAAAAAAASAAAAQRSGGGDDEDATAAPPPP 420
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 325 SRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTVDKSP 200
+RL Q S+ P+P +R A + P+P + ++ SP
Sbjct: 296 ARLWASQPSAAPSPVIRTPSASWSSAICLPSPQPSARLEASP 337
>01_07_0291 +
42555233-42555444,42556515-42556550,42556652-42556796,
42556885-42556938,42557130-42557260,42557830-42558056,
42558670-42558846,42558928-42559076
Length = 376
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 346 PSAIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPETVTV 212
P++ R ++ S+ P PR R AG+D P+ E +V
Sbjct: 37 PASSARPRRASSVSLSTAPRPRARAAGSDSPSNFGLPSKSEVNSV 81
>01_07_0233 + 42191465-42191953,42191976-42192272,42192310-42192690
Length = 388
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 132 HEASTQRTRLHLRHAIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGR 296
H A+ T ++L + +VPGL V+ + S +AP H RG GR
Sbjct: 77 HRAAAVATFVNLDTGRFLRKRVPGLRGCFLVAVTSAALVVLSDAAPPHGTRGEGR 131
>01_05_0536 -
23011618-23011635,23011871-23012052,23012160-23012396,
23012480-23012593,23012806-23013025,23013143-23013229
Length = 285
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 122 CKEPRSLHTAHPTPPTSRDPVEESGSRTFIDRNGLRG 232
C +PR HP PP RD + S + N L G
Sbjct: 85 CHDPREEDADHPAPPMGRDSDDIFASTNSDNMNMLIG 121
>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
Length = 774
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +2
Query: 263 RARASHPRCRARRPLPRGQSR-TAHD---SGRPRARSSIT 370
+AR+SH A RP P G+ + + HD S RP + S T
Sbjct: 676 QARSSHSSRPASRPKPSGKKKISEHDTDKSRRPHTKKSAT 715
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,941,386
Number of Sequences: 37544
Number of extensions: 304490
Number of successful extensions: 1484
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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