Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_G18
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 31 0.50
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 31 0.50
AL032625-1|CAA21523.1| 326|Caenorhabditis elegans Hypothetical ... 30 0.87
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 1.5
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 29 2.0
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical ... 29 2.0
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 29 2.0
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 28 2.7
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 28 2.7
Z93373-3|CAD54120.1| 449|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z83245-12|CAD54180.1| 449|Caenorhabditis elegans Hypothetical p... 27 4.6
AL033514-19|CAA22104.1| 696|Caenorhabditis elegans Hypothetical... 27 4.6
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 27 8.1
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 27 8.1
AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
protein W09C2.3c protein.
Length = 1249
Score = 30.7 bits (66), Expect = 0.50
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 198 EPDSSTGSRDVGGVGCAVWRLRGSLQRRGLAE*ISRLKS 82
EP G +D GC++ LRG ++ RG AE I RL +
Sbjct: 24 EPKGENGKKDAKEFGCSLGDLRGLMEARG-AEAIVRLST 61
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 30.7 bits (66), Expect = 0.50
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 198 EPDSSTGSRDVGGVGCAVWRLRGSLQRRGLAE*ISRLKS 82
EP G +D GC++ LRG ++ RG AE I RL +
Sbjct: 24 EPKGENGKKDAKEFGCSLGDLRGLMEARG-AEAIVRLST 61
>AL032625-1|CAA21523.1| 326|Caenorhabditis elegans Hypothetical
protein Y37H9A.2 protein.
Length = 326
Score = 29.9 bits (64), Expect = 0.87
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 104 SASPRRCKEPRSLHTAHPTPPTSRDPVEESGSRTFIDRNG--LRGGWCSNTIIVVRARA- 274
S S R SLHT PT P + + RTF+ N L G N +R+
Sbjct: 191 SGSRSRFPTELSLHTIQPTLSYETAPTDATADRTFVQPNATELSGNRSRNQAAPTGSRSG 250
Query: 275 SHPRCRARRPLPRGQSR 325
S R A + G+SR
Sbjct: 251 SRSRTSAASNVGAGRSR 267
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 110 SPRRCKEPRSLHTAHPTPP 166
+PR C EP L T PTPP
Sbjct: 490 TPRECHEPDELMTLDPTPP 508
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 189 SSTGSRDVGGVGCAVWRLRG 130
SS G R VGG C WR RG
Sbjct: 676 SSYGGRSVGGRSCKSWRSRG 695
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 189 SSTGSRDVGGVGCAVWRLRG 130
SS G R VGG C WR RG
Sbjct: 676 SSYGGRSVGGRSCKSWRSRG 695
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 189 SSTGSRDVGGVGCAVWRLRG 130
SS G R VGG C WR RG
Sbjct: 676 SSYGGRSVGGRSCKSWRSRG 695
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 189 SSTGSRDVGGVGCAVWRLRG 130
SS G R VGG C WR RG
Sbjct: 676 SSYGGRSVGGRSCKSWRSRG 695
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 189 SSTGSRDVGGVGCAVWRLRG 130
SS G R VGG C WR RG
Sbjct: 676 SSYGGRSVGGRSCKSWRSRG 695
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 189 SSTGSRDVGGVGCAVWRLRG 130
SS G R VGG C WR RG
Sbjct: 676 SSYGGRSVGGRSCKSWRSRG 695
>AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical
protein C16A11.3 protein.
Length = 726
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -1
Query: 237 QPPRRPLRSIKV--LEPDSSTGSRDVGGVGCAVWR 139
+PPR P+ SIK+ ++T +R + VGCA W+
Sbjct: 13 EPPRAPVSSIKIECQCGTNNTNNRLIKCVGCAQWQ 47
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 189 SSTGSRDVGGVGCAVWRLRG 130
SS G R VGG C WR RG
Sbjct: 676 SSYGGRSVGGRSCKSWRSRG 695
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
protein W09C2.3a protein.
Length = 1252
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -1
Query: 195 PDSSTG-SRDVGGVGCAVWRLRGSLQRRGLAE*ISRLKS 82
PD++ G ++D GC++ LRG ++ RG AE I RL +
Sbjct: 27 PDTNAGKTKDAKEFGCSLGDLRGLMEARG-AEAIVRLST 64
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -1
Query: 195 PDSSTG-SRDVGGVGCAVWRLRGSLQRRGLAE*ISRLKS 82
PD++ G ++D GC++ LRG ++ RG AE I RL +
Sbjct: 27 PDTNAGKTKDAKEFGCSLGDLRGLMEARG-AEAIVRLST 64
>Z93373-3|CAD54120.1| 449|Caenorhabditis elegans Hypothetical
protein ZK131.11b protein.
Length = 449
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 334 VGGSRLATRQRSSRPTPRMRCAGAD 260
VGG+R T +RS P R++C+ +
Sbjct: 29 VGGARNMTERRSEEPLSRLKCSSPE 53
>Z83245-12|CAD54180.1| 449|Caenorhabditis elegans Hypothetical
protein ZK131.11b protein.
Length = 449
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 334 VGGSRLATRQRSSRPTPRMRCAGAD 260
VGG+R T +RS P R++C+ +
Sbjct: 29 VGGARNMTERRSEEPLSRLKCSSPE 53
>AL033514-19|CAA22104.1| 696|Caenorhabditis elegans Hypothetical
protein Y75B8A.19 protein.
Length = 696
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 338 YRGRFATGHAAKVVSPDTSDEMRGRGRR*SCCYTSP 231
YR + GH A++ P ++E SC Y++P
Sbjct: 619 YRKNTSEGHLAEIFGPTNNEEAEEEPSLPSCSYSTP 654
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 299 RPLPRGQSRTAHDSGRPRARSSIT 370
R PR + +HDSGRPR+ + ++
Sbjct: 507 RHRPRSPTDVSHDSGRPRSPTDLS 530
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 299 RPLPRGQSRTAHDSGRPRARSSIT 370
R PR + +HDSGRPR+ + ++
Sbjct: 507 RHRPRSPTDVSHDSGRPRSPTDLS 530
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 104 SASPRRCKEPRSLHTAHPTPPTSRDPVEES 193
S+ P+R ++ LH AHP P P + S
Sbjct: 137 SSRPKRVRQRDPLHPAHPLLPLRNMPYDSS 166
>AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical
protein T21D12.12 protein.
Length = 183
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 78 DGNSNNFTSYIYLKNF 31
DGN+NNF +Y KNF
Sbjct: 166 DGNANNFATYNECKNF 181
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,927,578
Number of Sequences: 27780
Number of extensions: 208541
Number of successful extensions: 784
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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