Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_G16
(734 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 317 2e-86
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 317 2e-86
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 317 2e-86
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 317 2e-86
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 317 2e-86
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 317 2e-86
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 317 2e-86
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 317 3e-86
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 309 8e-84
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 309 8e-84
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 309 8e-84
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 309 8e-84
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 309 8e-84
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 309 8e-84
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 302 7e-82
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 299 7e-81
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 295 8e-80
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 71 3e-12
BC128390-1|AAI28391.1| 1682|Homo sapiens ADAMTSL3 protein protein. 33 0.80
BC128389-1|AAI28390.1| 1691|Homo sapiens ADAMTS-like 3 protein. 33 0.80
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 33 0.80
AB033059-1|BAA86547.1| 1023|Homo sapiens KIAA1233 protein protein. 33 0.80
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 33 1.4
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 32 2.5
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 32 2.5
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 32 2.5
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 32 2.5
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 2.5
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 2.5
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 32 2.5
AY044164-1|AAK94675.1| 1244|Homo sapiens lymphocyte alpha-kinase... 31 3.2
AK131090-1|BAC85140.1| 853|Homo sapiens FLJ00302 protein protein. 31 3.2
AB040960-1|BAA96051.1| 801|Homo sapiens KIAA1527 protein protein. 31 3.2
BC060780-1|AAH60780.1| 1085|Homo sapiens ALPK1 protein protein. 31 5.7
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 5.7
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 5.7
AF034970-1|AAC13265.1| 412|Homo sapiens docking protein protein. 31 5.7
AF088541-1|AAC96163.1| 47|Homo sapiens T-cell receptor beta ch... 30 7.5
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 9.9
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 9.9
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 9.9
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 317 bits (779), Expect = 2e-86
Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKY
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+TGG NLGR+G I +RERHPG
Sbjct: 182 MVTGGANLGRIGVITNRERHPG 203
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 317 bits (779), Expect = 2e-86
Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKY
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+TGG NLGR+G I +RERHPG
Sbjct: 182 MVTGGANLGRIGVITNRERHPG 203
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 317 bits (779), Expect = 2e-86
Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKY
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+TGG NLGR+G I +RERHPG
Sbjct: 182 MVTGGANLGRIGVITNRERHPG 203
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 317 bits (779), Expect = 2e-86
Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKY
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+TGG NLGR+G I +RERHPG
Sbjct: 182 MVTGGANLGRIGVITNRERHPG 203
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 317 bits (779), Expect = 2e-86
Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKY
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+TGG NLGR+G I +RERHPG
Sbjct: 182 MVTGGANLGRIGVITNRERHPG 203
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 317 bits (779), Expect = 2e-86
Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKY
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+TGG NLGR+G I +RERHPG
Sbjct: 182 MVTGGANLGRIGVITNRERHPG 203
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 317 bits (779), Expect = 2e-86
Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKY
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+TGG NLGR+G I +RERHPG
Sbjct: 182 MVTGGANLGRIGVITNRERHPG 203
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 317 bits (778), Expect = 3e-86
Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKY
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+TGG NLGR+G I +RERHPG
Sbjct: 182 MVTGGANLGRIGVITNRERHPG 203
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 309 bits (758), Expect = 8e-84
Identities = 142/202 (70%), Positives = 163/202 (80%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 62 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+ GG NLGRVG I +RERHPG
Sbjct: 182 MVIGGANLGRVGVITNRERHPG 203
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 309 bits (758), Expect = 8e-84
Identities = 142/202 (70%), Positives = 163/202 (80%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+ GG NLGRVG I +RERHPG
Sbjct: 181 MVIGGANLGRVGVITNRERHPG 202
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 309 bits (758), Expect = 8e-84
Identities = 142/202 (70%), Positives = 163/202 (80%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 62 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+ GG NLGRVG I +RERHPG
Sbjct: 182 MVIGGANLGRVGVITNRERHPG 203
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 309 bits (758), Expect = 8e-84
Identities = 142/202 (70%), Positives = 163/202 (80%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 62 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+ GG NLGRVG I +RERHPG
Sbjct: 182 MVIGGANLGRVGVITNRERHPG 203
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 309 bits (758), Expect = 8e-84
Identities = 142/202 (70%), Positives = 163/202 (80%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 62 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+ GG NLGRVG I +RERHPG
Sbjct: 182 MVIGGANLGRVGVITNRERHPG 203
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 309 bits (758), Expect = 8e-84
Identities = 142/202 (70%), Positives = 163/202 (80%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 62 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+ GG NLGRVG I +RERHPG
Sbjct: 182 MVIGGANLGRVGVITNRERHPG 203
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 302 bits (742), Expect = 7e-82
Identities = 133/172 (77%), Positives = 152/172 (88%)
Frame = +3
Query: 195 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 374
STGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+S
Sbjct: 12 STGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVIS 71
Query: 375 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPD 554
I+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPD
Sbjct: 72 IDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPD 131
Query: 555 PLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRERHPG 710
PLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I +RERHPG
Sbjct: 132 PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 183
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 299 bits (734), Expect = 7e-81
Identities = 131/171 (76%), Positives = 151/171 (88%)
Frame = +3
Query: 198 TGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 377
+GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI
Sbjct: 14 SGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISI 73
Query: 378 EKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDP 557
+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+LVTHD RT+RYPDP
Sbjct: 74 DKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDP 133
Query: 558 LIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRERHPG 710
LIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I +RERHPG
Sbjct: 134 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 184
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 295 bits (725), Expect = 8e-80
Identities = 136/202 (67%), Positives = 158/202 (78%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYALTGNEV 284
ARGPKKHLKR KH G STGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 61
Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKY
Sbjct: 62 KKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKY 121
Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ T KI FIKFD+GN+C
Sbjct: 122 KLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVC 181
Query: 645 MITGGRNLGRVGTIVSRERHPG 710
M+ G NLGRVG I +RERHPG
Sbjct: 182 MVIAGANLGRVGVITNRERHPG 203
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/55 (67%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +3
Query: 111 ARGPKKHLKR*TPLKHGCWT--AGGCTRAASTGPHKLRECLPLVIFLRNRLKYAL 269
ARGPKKHLKR KH G STGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>BC128390-1|AAI28391.1| 1682|Homo sapiens ADAMTSL3 protein protein.
Length = 1682
Score = 33.5 bits (73), Expect = 0.80
Identities = 24/98 (24%), Positives = 39/98 (39%)
Frame = +2
Query: 77 TMDPPXXCRKFGTRAKEALEALNAPKAWMLDSWRVYARGLDGSPQAARMLAASDLPAKSA 256
T PP CR A +A + P W ++ W+ +R G Q R+ L S
Sbjct: 736 TPAPPEECRDEKPHALQACNQFDCPPGWHIEEWQQCSRTCGGGTQNRRVTCRQLLTDGSF 795
Query: 257 QVRAHRQ*GA*DCEATSHQSGRESAD*PHVPGGIYGRC 370
+ +A+SH+S + PH+ G + +C
Sbjct: 796 LNLSDEL--CQGPKASSHKSCARTDCPPHLAVGDWSKC 831
>BC128389-1|AAI28390.1| 1691|Homo sapiens ADAMTS-like 3 protein.
Length = 1691
Score = 33.5 bits (73), Expect = 0.80
Identities = 24/98 (24%), Positives = 39/98 (39%)
Frame = +2
Query: 77 TMDPPXXCRKFGTRAKEALEALNAPKAWMLDSWRVYARGLDGSPQAARMLAASDLPAKSA 256
T PP CR A +A + P W ++ W+ +R G Q R+ L S
Sbjct: 736 TPAPPEECRDEKPHALQACNQFDCPPGWHIEEWQQCSRTCGGGTQNRRVTCRQLLTDGSF 795
Query: 257 QVRAHRQ*GA*DCEATSHQSGRESAD*PHVPGGIYGRC 370
+ +A+SH+S + PH+ G + +C
Sbjct: 796 LNLSDEL--CQGPKASSHKSCARTDCPPHLAVGDWSKC 831
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.80
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 572 RLGAARHLHQQDHGLHQVRLRQPLHDHR 655
R AARH Q H LHQ+ L+Q LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>AB033059-1|BAA86547.1| 1023|Homo sapiens KIAA1233 protein protein.
Length = 1023
Score = 33.5 bits (73), Expect = 0.80
Identities = 24/98 (24%), Positives = 39/98 (39%)
Frame = +2
Query: 77 TMDPPXXCRKFGTRAKEALEALNAPKAWMLDSWRVYARGLDGSPQAARMLAASDLPAKSA 256
T PP CR A +A + P W ++ W+ +R G Q R+ L S
Sbjct: 68 TPAPPEECRDEKPHALQACNQFDCPPGWHIEEWQQCSRTCGGGTQNRRVTCRQLLTDGSF 127
Query: 257 QVRAHRQ*GA*DCEATSHQSGRESAD*PHVPGGIYGRC 370
+ +A+SH+S + PH+ G + +C
Sbjct: 128 LNLSDEL--CQGPKASSHKSCARTDCPPHLAVGDWSKC 163
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 581 AARHLHQQDHGLHQVRLRQPLHDHR 655
AARH Q H LHQ+ L+Q LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 476 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 604
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 476 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 604
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 476 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 604
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 476 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 604
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 342 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 488
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 488 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 589
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 476 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 604
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY044164-1|AAK94675.1| 1244|Homo sapiens lymphocyte alpha-kinase
protein.
Length = 1244
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 28 PHKGTKLELHRGGGALNYGSPGXLQEIRHEGQRST*SVKRP*SMDVGQLAGVRARPRRVP 207
PH + L G G L G+P +QE+R+ G R+T + RP S + RP+ +
Sbjct: 676 PHNTPGIFLAPGAGLLE-GAPEGIQEVRNMGPRNTSAHSRP-SYRSASWSSDSGRPKNIG 733
Query: 208 T 210
T
Sbjct: 734 T 734
>AK131090-1|BAC85140.1| 853|Homo sapiens FLJ00302 protein protein.
Length = 853
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 28 PHKGTKLELHRGGGALNYGSPGXLQEIRHEGQRST*SVKRP*SMDVGQLAGVRARPRRVP 207
PH + L G G L G+P +QE+R+ G R+T + RP S + RP+ +
Sbjct: 507 PHNTPGIFLAPGAGLLE-GAPEGIQEVRNMGPRNTSAHSRP-SYRSASWSSDSGRPKNIG 564
Query: 208 T 210
T
Sbjct: 565 T 565
>AB040960-1|BAA96051.1| 801|Homo sapiens KIAA1527 protein protein.
Length = 801
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 28 PHKGTKLELHRGGGALNYGSPGXLQEIRHEGQRST*SVKRP*SMDVGQLAGVRARPRRVP 207
PH + L G G L G+P +QE+R+ G R+T + RP S + RP+ +
Sbjct: 233 PHNTPGIFLAPGAGLLE-GAPEGIQEVRNMGPRNTSAHSRP-SYRSASWSSDSGRPKNIG 290
Query: 208 T 210
T
Sbjct: 291 T 291
>BC060780-1|AAH60780.1| 1085|Homo sapiens ALPK1 protein protein.
Length = 1085
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 28 PHKGTKLELHRGGGALNYGSPGXLQEIRHEGQRST*SVKRP*SMDVGQLAGVRARPRRVP 207
PH + L G G L G+P +QE+R+ G R+T + RP S + RP+ +
Sbjct: 676 PHNTPGIFLAPGAGLLE-GAPEGIQEVRNMGPRNTSAHSRP-SYRSASWSSDSGRPKNMG 733
Query: 208 T 210
T
Sbjct: 734 T 734
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 5.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 452 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG 568
R ++ G ARR R +VPG ARR PGPA +G
Sbjct: 257 RLSPESAPGPARRGRA---SVPGPARRGCDSAPGPARRG 292
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 342 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 488
+YPA + D I + E+FRL+ + + +I + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AF034970-1|AAC13265.1| 412|Homo sapiens docking protein protein.
Length = 412
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 121 GPRAEFPAAXRGIHSLERRHRGGAPALSLYEGNFEL 14
GP EFP R + ER HR G+ L E + EL
Sbjct: 146 GPHKEFPVTMRPTEASERCHRRGSYTLRAGESSLEL 181
>AF088541-1|AAC96163.1| 47|Homo sapiens T-cell receptor beta chain
protein.
Length = 47
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 36 RDKAGAPPRWRRSKLWIPRXAAGNSARGPKKHL 134
R + PPR+RR ++ PR A +SARGP+K +
Sbjct: 14 RARPPIPPRYRRYAVFWPRHPA-DSARGPEKRV 45
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 252 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 428
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 39 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 97
Query: 429 TIHRI 443
HRI
Sbjct: 98 KKHRI 102
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 333 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATG 497
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 252 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 428
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 784 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 842
Query: 429 TIHRI 443
HRI
Sbjct: 843 KKHRI 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,759,398
Number of Sequences: 237096
Number of extensions: 2530880
Number of successful extensions: 16223
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 15780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16191
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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