Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_G16
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   314   1e-85
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   314   1e-85
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   314   1e-85
D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   308   5e-84
AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA...    30   3.8  

>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  314 bits (770), Expect = 1e-85
 Identities = 149/202 (73%), Positives = 167/202 (82%), Gaps = 2/202 (0%)
 Frame = +3

Query: 111 ARGPKKHLKR*TPLKHGCWTAGGCTRAA--STGPHKLRECLPLVIFLRNRLKYALTGNEV 284
           ARGPKKHLKR    K       G   A   STGPHKLRE LPL+IFLRNRLKYAL G EV
Sbjct: 2   ARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEV 61

Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
            KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKY
Sbjct: 62  TKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKY 121

Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
           KLCKV++   G K VP+LVTHDGRT+RYPDPLI  NDSVQ+DI++ KI D+IKFDSGNLC
Sbjct: 122 KLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLC 181

Query: 645 MITGGRNLGRVGTIVSRERHPG 710
           MITGGRNLGRVGT+V+RERHPG
Sbjct: 182 MITGGRNLGRVGTVVNRERHPG 203


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  314 bits (770), Expect = 1e-85
 Identities = 149/202 (73%), Positives = 167/202 (82%), Gaps = 2/202 (0%)
 Frame = +3

Query: 111 ARGPKKHLKR*TPLKHGCWTAGGCTRAA--STGPHKLRECLPLVIFLRNRLKYALTGNEV 284
           ARGPKKHLKR    K       G   A   STGPHKLRE LPL+IFLRNRLKYAL G EV
Sbjct: 2   ARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEV 61

Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
            KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKY
Sbjct: 62  TKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKY 121

Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
           KLCKV++   G K VP+LVTHDGRT+RYPDPLI  NDSVQ+DI++ KI D+IKFDSGNLC
Sbjct: 122 KLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLC 181

Query: 645 MITGGRNLGRVGTIVSRERHPG 710
           MITGGRNLGRVGT+V+RERHPG
Sbjct: 182 MITGGRNLGRVGTVVNRERHPG 203


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  314 bits (770), Expect = 1e-85
 Identities = 149/202 (73%), Positives = 167/202 (82%), Gaps = 2/202 (0%)
 Frame = +3

Query: 111 ARGPKKHLKR*TPLKHGCWTAGGCTRAA--STGPHKLRECLPLVIFLRNRLKYALTGNEV 284
           ARGPKKHLKR    K       G   A   STGPHKLRE LPL+IFLRNRLKYAL G EV
Sbjct: 2   ARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEV 61

Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
            KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKY
Sbjct: 62  TKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKY 121

Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
           KLCKV++   G K VP+LVTHDGRT+RYPDPLI  NDSVQ+DI++ KI D+IKFDSGNLC
Sbjct: 122 KLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLC 181

Query: 645 MITGGRNLGRVGTIVSRERHPG 710
           MITGGRNLGRVGT+V+RERHPG
Sbjct: 182 MITGGRNLGRVGTVVNRERHPG 203


>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  308 bits (756), Expect = 5e-84
 Identities = 147/202 (72%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
 Frame = +3

Query: 111 ARGPKKHLKR*TPLKHGCWTAGGCTRAA--STGPHKLRECLPLVIFLRNRLKYALTGNEV 284
           ARGPKKHLKR    K       G   A   STGPHKLRE LPL+ FLRNRLKYAL G EV
Sbjct: 2   ARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEV 61

Query: 285 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 464
            KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKY
Sbjct: 62  TKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKY 121

Query: 465 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 644
           KLCKV++   G K VP+LVTHDGRT+RYPDPLI  NDSVQ+DI++ KI D+IKFDSGNLC
Sbjct: 122 KLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLC 181

Query: 645 MITGGRNLGRVGTIVSRERHPG 710
           MITGGRNLGRVGT+V+RERHPG
Sbjct: 182 MITGGRNLGRVGTVVNRERHPG 203


>AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA
           protein.
          Length = 1844

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 21/62 (33%), Positives = 28/62 (45%)
 Frame = +2

Query: 488 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQES 667
           R  P   A PG A     P P PA+Q   +G  +H   Q H  +Q +     H + R +S
Sbjct: 13  RSVPDVTASPGRA----PPGPLPANQMPAMGNQQHHGNQQHHGNQQQHHGNQHSNHRGQS 68

Query: 668 GS 673
           GS
Sbjct: 69  GS 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,641,534
Number of Sequences: 53049
Number of extensions: 783213
Number of successful extensions: 2606
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2589
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)