Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_G09
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 234 4e-62
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 234 4e-62
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 227 6e-60
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.61
02_01_0759 - 5628913-5630870,5631023-5631047 31 0.61
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 31 0.81
06_03_0012 + 15383628-15383823,15383915-15384100,15384326-15385518 30 1.4
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 30 1.4
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 4.3
06_03_0370 - 19978462-19978800,19982435-19982591,19982683-199829... 28 4.3
09_06_0088 + 20774901-20775491,20776172-20776687 28 5.7
03_03_0149 + 14843880-14844145,14846501-14846561,14846608-148467... 28 5.7
09_06_0319 - 22293869-22293906,22294539-22295808 27 7.5
08_02_0567 + 18769742-18769790,18769928-18771351 27 7.5
06_02_0084 - 11547820-11548773 27 7.5
01_06_0898 - 32832665-32832724,32832761-32832815,32832957-328331... 27 7.5
07_03_0770 - 21375099-21375122,21375321-21375448,21375541-213756... 27 10.0
06_01_0129 + 1009097-1009681 27 10.0
05_01_0447 + 3554146-3554183,3554295-3554608,3555201-3555328,355... 27 10.0
01_01_0463 - 3424951-3425065,3425191-3425258,3425362-3425586,342... 27 10.0
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260... 27 10.0
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 234 bits (572), Expect = 4e-62
Identities = 108/146 (73%), Positives = 122/146 (83%)
Frame = +1
Query: 106 SRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKN 285
SR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ KN
Sbjct: 20 SRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKN 79
Query: 286 CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVR 465
GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR
Sbjct: 80 AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVR 139
Query: 466 SSDRWKAQVIEALRRAKFKFPGRQKI 543
+ EALRRAKFKFPGRQKI
Sbjct: 140 CKESNAKHAEEALRRAKFKFPGRQKI 165
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 234 bits (572), Expect = 4e-62
Identities = 107/146 (73%), Positives = 123/146 (84%)
Frame = +1
Query: 106 SRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKN 285
SR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI CNKY+ K+
Sbjct: 327 SRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKH 386
Query: 286 CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVR 465
GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++SVR
Sbjct: 387 AGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLSVR 446
Query: 466 SSDRWKAQVIEALRRAKFKFPGRQKI 543
D A EALRRAKFKFPGRQ++
Sbjct: 447 CRDANAAHAQEALRRAKFKFPGRQRV 472
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 227 bits (554), Expect = 6e-60
Identities = 105/146 (71%), Positives = 120/146 (82%)
Frame = +1
Query: 106 SRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKN 285
SR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA RI CNKY+ K+
Sbjct: 16 SRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKS 75
Query: 286 CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVR 465
GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR
Sbjct: 76 AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVR 135
Query: 466 SSDRWKAQVIEALRRAKFKFPGRQKI 543
EALRRAKFKFPGRQKI
Sbjct: 136 CKPNNAVHASEALRRAKFKFPGRQKI 161
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.61
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 172 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 291
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 31.1 bits (67), Expect = 0.61
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -1
Query: 473 SLERTDIMGCPIRT---RATVPWGFPNAPRIPVWSLSAPAHDNILLMRMTWKGCSLIRMW 303
SLER DI CP+ T A V G PN + V S S +D +R + CS I+
Sbjct: 233 SLERLDITRCPLITDKGLAAVAHGCPNLLSLTVESCSGVGNDG---LRAIGRSCSKIQAL 289
Query: 302 N 300
N
Sbjct: 290 N 290
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 30.7 bits (66), Expect = 0.81
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 277 RGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPLS 170
R CC GL P P S+ R+ +L A S P+S
Sbjct: 179 RSRCCRHRGLSPPPSRSSPRSPSSLPAAPAASLPVS 214
>06_03_0012 + 15383628-15383823,15383915-15384100,15384326-15385518
Length = 524
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 157 PSRKYGSLGQAHPDKTGKDLGKILKPVYLTISITSRCRRPMVSLVRF 17
PS+ G G+ P + K+LG+I +P L I + + C +++ + F
Sbjct: 9 PSKPPGPAGERRPPRLAKELGRI-EPKKLGIGLVAGCCLALLTYISF 54
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -1
Query: 452 MGCPIRTRATVPWGFPNAPRIPVWSLSAPAH 360
+ CP+ + + VP P++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 406 GKPQGTVARVRIGQPIMSVRSSD 474
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>06_03_0370 -
19978462-19978800,19982435-19982591,19982683-19982917,
19983029-19983239,19985597-19985700,19985871-19985957,
19986225-19986354
Length = 420
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -1
Query: 194 HSGKSSTVALFLPKSKIRIFGSGTPRQNRERFRENFKTGLSYNIDNISL 48
H G ++ AL PK R +G G R+ R +FRE G ++ +++
Sbjct: 371 HGGVAALSALPTPKQPARRYGGG--REQRPKFREVLANGHDWDKKTVTV 417
>09_06_0088 + 20774901-20775491,20776172-20776687
Length = 368
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 515 LARRRASMT---CAFQRSLERTDIMGCPIRTRATVPWGFPNAPRIPVWSLSAPAHDNILL 345
L R +S+T C+ ++ T+++GCP+R V G P + R + P D +
Sbjct: 207 LELRESSITPIHCSDEQLAAVTEVLGCPVRLLPIVYLGLPLSVRKLGKADLQPMMDRLAK 266
Query: 344 MRMTWK 327
+WK
Sbjct: 267 SLASWK 272
>03_03_0149 +
14843880-14844145,14846501-14846561,14846608-14846720,
14848448-14848540,14849578-14849793,14853773-14856023
Length = 999
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 367 QRTTTFY*CG*HGRGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQ 233
+ TTT CG HGR ++SS L+++++ G+ +Y + PQ
Sbjct: 134 RETTTTSSCGEHGRILLSSP-SPSLFKANVLGSLAYKYITMGIPQ 177
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 406 GKPQGTVARVRIGQPIMSVRSSD 474
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>08_02_0567 + 18769742-18769790,18769928-18771351
Length = 490
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +1
Query: 391 MRGAFGKPQG--TVARVRIGQPIMSVRSSDRW-KAQVIEALRRAKFKFPGRQKI 543
MR G+ G A +RI + I + ++++ +AQV+EA RR F+ PGR ++
Sbjct: 24 MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHRL 76
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 355 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 483
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
>01_06_0898 -
32832665-32832724,32832761-32832815,32832957-32833135,
32833218-32833328,32833600-32833647,32833810-32833949,
32834402-32834539,32834660-32834804,32834936-32835002,
32835226-32835329,32835444-32835647
Length = 416
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 142 GSLGQAHPDKTGKDLGKILKPVYLTISITSRC 47
GSL + H +K+ K + Y T S+ +RC
Sbjct: 332 GSLSRTHKNKSNKSKSPVTTIQYRTFSLVARC 363
>07_03_0770 -
21375099-21375122,21375321-21375448,21375541-21375672,
21377016-21377874
Length = 380
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 313 SGCGTDLYRSSLRGTCCNR 257
+GCGT++ R ++ G CNR
Sbjct: 97 AGCGTNVSRDAVAGPTCNR 115
>06_01_0129 + 1009097-1009681
Length = 194
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PPGCRIGRGRPWGA 45
PPGCRIGR R G+
Sbjct: 28 PPGCRIGRARGGGS 41
>05_01_0447 +
3554146-3554183,3554295-3554608,3555201-3555328,
3555623-3555898,3556076-3556206,3556792-3556909,
3556980-3557072,3557649-3557723,3557813-3557890,
3558020-3558031
Length = 420
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = -2
Query: 175 LSLSFCPSRKYGSLGQAHPDKTGKDLGKILKPVYLTISITSRCRRPMVSLVRFCSP 8
LS P GS+ H D G +G P L ISI C R P
Sbjct: 246 LSCQLAPCGSGGSVIDQHGDVVGMAIGAPPNPDILPISIVQTCIEMWTKFSRIARP 301
>01_01_0463 -
3424951-3425065,3425191-3425258,3425362-3425586,
3425669-3425804,3425905-3426107,3426227-3426340,
3426432-3426506,3426625-3426783,3426868-3427038,
3427227-3427274,3427366-3427491,3427611-3427718,
3427800-3427913,3428320-3428496
Length = 612
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -1
Query: 179 STVALFLPKSKIRIFGSGTPRQNRERFRENFKTGLSYNIDNISLSAPHGLPRP 21
S + L P + +R G E + FK G ++ + S S+P +P P
Sbjct: 66 SNLGLIKPNTLVRFRGMVQDMLGNEFYVGAFKDGSTWRTNKFSDSSPFSMPHP 118
>01_01_0323 +
2598850-2598924,2599756-2600844,2601352-2602589,
2602637-2602810,2603032-2603098,2603735-2603757,
2603899-2604001,2604087-2604848,2605098-2605292,
2605496-2606115,2606429-2606480,2606558-2607197,
2608366-2608574,2608660-2609189,2609500-2609566,
2609651-2609728,2610415-2610483,2610569-2610643
Length = 2021
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 247 LPAPQNSAART--HQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTGKDLGKI 89
LP P N A + H++ +A HP + + + GSL AHPD ++LG I
Sbjct: 637 LPHPSNMAGKRKMHESSNAADTQLHPEN-AISYTMTDGSLLYAHPDSRIEELGII 690
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,086,589
Number of Sequences: 37544
Number of extensions: 393284
Number of successful extensions: 1111
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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