Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_G09
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   1.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.7  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    22   4.8  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    22   4.8  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    22   4.8  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   4.8  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 250 LLPAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLG 131
           L+  P  + +  H  + A  V  + LSLS  P   +GS G
Sbjct: 2   LVARPMQALSIRHAVILASFVWIYALSLSLPPLFGWGSYG 41


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 137 FGSGTPRQNRERFREN 90
           FG+G P +N E F +N
Sbjct: 524 FGNGDPPENGEAFAQN 539


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 103 DLGKILKPVYLTISITSRCRR 41
           DL +  +P   T S+T  CRR
Sbjct: 83  DLAEASQPTSTTTSVTPSCRR 103


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 122 VCLTQRSVFSTWAKRERQWMTSH 190
           +CLT+R +   +  R  +W   H
Sbjct: 45  LCLTERQIKIWFQNRRMKWKKEH 67


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
 Frame = +2

Query: 14  AESDEGDHG----APTARCYRYCKINRF 85
           A+ D+ D G     P+  CY YC +  F
Sbjct: 54  AQIDDVDKGNLVNEPSITCYMYCLLEAF 81


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
 Frame = +2

Query: 14  AESDEGDHG----APTARCYRYCKINRF 85
           A+ D+ D G     P+  CY YC +  F
Sbjct: 54  AQIDDVDKGNLVNEPSITCYMYCLLEAF 81


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 414 PRHSSACAYWTAHYVCTL 467
           P+  +   YW+ +++CT+
Sbjct: 31  PKDHNGSIYWSMYHLCTV 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,317
Number of Sequences: 438
Number of extensions: 3803
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)