BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_G06
(635 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P... 134 9e-32
AY226545-1|AAO47371.1| 303|Drosophila melanogaster pickpocket 1... 30 3.0
AY060674-1|AAL28222.1| 876|Drosophila melanogaster GH10703p pro... 30 3.0
AE014297-2485|AAF55525.1| 876|Drosophila melanogaster CG7146-PA... 30 3.0
AE014134-1079|AAF52371.1| 463|Drosophila melanogaster CG9501-PA... 30 3.0
AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p pro... 29 5.3
>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
protein.
Length = 1884
Score = 134 bits (324), Expect = 9e-32
Identities = 63/102 (61%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
Frame = +2
Query: 179 SKWEKMDSSAQLARLDGTSKPLRPSQL-SMEDYLQLDDWKP-NVAKPGKKTVRWADLEER 352
SKWE+ + LARLDGT + ++ + SM DYLQL+DWKP + GKK VRWAD+EE+
Sbjct: 1782 SKWERDTTEDNLARLDGTKRLMQNRRTTSMADYLQLEDWKPPTTSDNGKKRVRWADIEEK 1841
Query: 353 REQEKMRAIGFVVGQTDWNRMTDPTLGSSALTQTKYIERVRR 478
R Q+KMRAIGFVVGQTDWNRM DP GS AL +TK+IER++R
Sbjct: 1842 RSQKKMRAIGFVVGQTDWNRMMDPNAGSRALNKTKFIERIKR 1883
>AY226545-1|AAO47371.1| 303|Drosophila melanogaster pickpocket 14
protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 255 WEGLSGLLVPSSRANCAEESIFSHFDVNTLS 163
W G +VP SR N A +++ +FD +TLS
Sbjct: 272 WFGFPIEVVPHSRTNVAVTAVYHYFDESTLS 302
>AY060674-1|AAL28222.1| 876|Drosophila melanogaster GH10703p
protein.
Length = 876
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 460 IFSLSEGTRSQCWVGHSVPVG 398
I LS+ R+ CWVGH+V VG
Sbjct: 152 IIELSDVPRTLCWVGHAVCVG 172
>AE014297-2485|AAF55525.1| 876|Drosophila melanogaster CG7146-PA
protein.
Length = 876
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 460 IFSLSEGTRSQCWVGHSVPVG 398
I LS+ R+ CWVGH+V VG
Sbjct: 152 IIELSDVPRTLCWVGHAVCVG 172
>AE014134-1079|AAF52371.1| 463|Drosophila melanogaster CG9501-PA
protein.
Length = 463
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 255 WEGLSGLLVPSSRANCAEESIFSHFDVNTLS 163
W G +VP SR N A +++ +FD +TLS
Sbjct: 272 WFGFPIEVVPHSRTNVAVTAVYHYFDESTLS 302
>AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p
protein.
Length = 950
Score = 29.1 bits (62), Expect = 5.3
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 228 VPASRLDPPSCQWKTIC 278
V +S+L+ PSCQW+ +C
Sbjct: 930 VSSSKLNDPSCQWRWVC 946
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,778,984
Number of Sequences: 53049
Number of extensions: 509459
Number of successful extensions: 1268
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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