Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_G03
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.   266   5e-73
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    24   4.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.5  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score =  266 bits (651), Expect = 5e-73
 Identities = 117/183 (63%), Positives = 133/183 (72%)
 Frame = +2

Query: 20  RNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPE 199
           +NHLI KDIRCKDDV+TH YTL+V+ DNTYEVLIDNEKVESG LE DWDFLPPKKIKDPE
Sbjct: 150 KNHLINKDIRCKDDVFTHFYTLVVRADNTYEVLIDNEKVESGSLEDDWDFLPPKKIKDPE 209

Query: 200 AKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDASKXXXXXXXXXXXXXXXXIDNPDYK 379
           AKKPEDW                     HIPDPDA+K                IDNP+YK
Sbjct: 210 AKKPEDWDDRATIADPDDTKPEDWDKPEHIPDPDATKPDDWDDEMDGEWEPPMIDNPEYK 269

Query: 380 GVWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLF 559
           G W PKQIDNPAYKG W+HPEIDNPEY  D +LY R+E+C+VG+D+WQVKSGTIF+NF+ 
Sbjct: 270 GEWKPKQIDNPAYKGVWVHPEIDNPEYEEDKSLYLREEVCAVGIDVWQVKSGTIFDNFMI 329

Query: 560 TDD 568
           T+D
Sbjct: 330 TND 332


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 482 CTGSSLECIQGCQSPGGSMVPCMQGCQ 402
           C G+  +C  GC    GS  PC   C+
Sbjct: 5   CCGNDCKCTSGC----GSGQPCATDCK 27


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 522 CHKSRPTEHISSRLYRFESGVYSGLSISG 436
           C K   T  I  +L +FES   S L++ G
Sbjct: 491 CAKQSETTRIEKQLEQFESAPRSKLAVYG 519



 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 197  LDP*SSSEVGSPSRLLIHQIQPSHC 123
            L P   SEV + + L IH+  P+ C
Sbjct: 1094 LTPQDMSEVQATAELTIHRYVPARC 1118


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = -3

Query: 341 LHPSHHPN-LQAYWHQG 294
           LHP+HHP  L   +H G
Sbjct: 179 LHPAHHPALLHPAYHTG 195


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = -3

Query: 341 LHPSHHPN-LQAYWHQG 294
           LHP+HHP  L   +H G
Sbjct: 179 LHPAHHPALLHPAYHTG 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,250
Number of Sequences: 2352
Number of extensions: 12294
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)