Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_G03
(580 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 222 1e-58
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 222 1e-58
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 32 0.34
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 31 0.59
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 31 0.59
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF014940-10|AAK73900.1| 243|Caenorhabditis elegans Hypothetical... 29 1.8
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 29 2.4
Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical pr... 28 4.2
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 7.3
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 7.3
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 27 7.3
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 7.3
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 7.3
L23649-3|AAA27909.2| 601|Caenorhabditis elegans Tyrosinase prot... 27 7.3
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 7.3
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 7.3
AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical ... 27 7.3
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 27 9.6
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 222 bits (543), Expect = 1e-58
Identities = 102/181 (56%), Positives = 114/181 (62%)
Frame = +2
Query: 23 NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEA 202
N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G LE DWD LP KKIKDP+A
Sbjct: 149 NKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDA 208
Query: 203 KKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDASKXXXXXXXXXXXXXXXXIDNPDYKG 382
KKPEDW HIPDPDA K IDNP+YKG
Sbjct: 209 KKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEWEPPMIDNPEYKG 268
Query: 383 VWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFT 562
W PKQI NPAYKG WIHPEI+NPEYTPD LY + ++G DLWQVKSGTIF+N + T
Sbjct: 269 EWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFDNIIIT 328
Query: 563 D 565
D
Sbjct: 329 D 329
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 222 bits (543), Expect = 1e-58
Identities = 102/181 (56%), Positives = 114/181 (62%)
Frame = +2
Query: 23 NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEA 202
N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G LE DWD LP KKIKDP+A
Sbjct: 149 NKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDA 208
Query: 203 KKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDASKXXXXXXXXXXXXXXXXIDNPDYKG 382
KKPEDW HIPDPDA K IDNP+YKG
Sbjct: 209 KKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEWEPPMIDNPEYKG 268
Query: 383 VWAPKQIDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFT 562
W PKQI NPAYKG WIHPEI+NPEYTPD LY + ++G DLWQVKSGTIF+N + T
Sbjct: 269 EWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFDNIIIT 328
Query: 563 D 565
D
Sbjct: 329 D 329
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 69.3 bits (162), Expect = 2e-12
Identities = 59/211 (27%), Positives = 79/211 (37%), Gaps = 42/211 (19%)
Frame = +2
Query: 56 DDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWD--FLPPKKI-------------- 187
DD THL+TL+VKP Y V +D + + G + +D PPK+I
Sbjct: 223 DDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDWDER 282
Query: 188 ---KDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXH----IPDPDASKXXXXXXXXXXXX 346
+D A KP+DW I DP+A K
Sbjct: 283 ENIEDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDEDMDGSW 342
Query: 347 XXXXIDNPDYKGV-----WAPKQIDNPAYKGPWIHPE--------------IDNPEYTPD 469
IDNP KG+ W I NP YKG WI P+ IDNP Y
Sbjct: 343 EAPLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPKISNPAFKGKWTARLIDNPNYFEP 402
Query: 470 SNLYKRDEICSVGLDLWQVKSGTIFNNFLFT 562
I +VG+++W + +F+N L T
Sbjct: 403 KPFAGLAPITAVGIEMWTMSENILFDNILIT 433
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 31.9 bits (69), Expect = 0.34
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 2 SEEFGTRNHLIKKDIRCKDDVYTHLYTLIVKPDN 103
+E+ G++NHLI + C D ++LYT++ K ++
Sbjct: 294 TEQLGSKNHLITDGLHC-HDALSYLYTILTKGES 326
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 17 TRNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 142
T+ I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12855 TKEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 17 TRNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 142
T+ I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12855 TKEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 30.7 bits (66), Expect = 0.78
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +3
Query: 129 RRLNLVN*KPTGTSYLRRRSRIQKQRNLKIGTTNPQSPTRKTRNPRTGTNLSTFRTLMPV 308
R + L++ K G Y+ RRS +QK NL + S T N T L TF +
Sbjct: 339 RNVTLIDGKAVGEVYMPRRSALQKGYNLSSYNYDDLSETAFIYNSTTKEYL-TFEVKRSI 397
Query: 309 SLKIGMMRWMESG 347
+ K+ ++ M G
Sbjct: 398 AAKLDYVQNMNLG 410
>AF014940-10|AAK73900.1| 243|Caenorhabditis elegans Hypothetical
protein W02D7.10 protein.
Length = 243
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 332 SHHPNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRP 219
+ +PN YW G Q+ P P V G+ L+ P
Sbjct: 168 TQYPNQTYYWSDGSASEQMVPQPEVIAPGGKALYTFDP 205
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 65 YTHLYTLIVKPDN-TYEVLIDNEKVESGELEADWDFLPP 178
+TH +TL VKP N Y+ DN+ ++ + E F P
Sbjct: 23 HTHKWTLFVKPGNRDYDEFPDNKLIQKVKFEIHESFAQP 61
>Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical
protein T20B3.12 protein.
Length = 367
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +3
Query: 252 TRNPRTGTNLSTFRTL----MPVSLKIGMMRWMESGNHL*STTPTT 377
TR P T +ST TL +P++ K W S + ST+PT+
Sbjct: 58 TRQPICETAVSTISTLATSTLPITTKSSTTHWSTSSTPISSTSPTS 103
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 531 DLTCHKSRPTEHISSRLYRFESGVYS 454
D+ C++SR EHI++ + F++ +YS
Sbjct: 385 DVPCYRSRSKEHITNGMADFKNDMYS 410
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = -3
Query: 464 ECIQGCQSPGGSMVP-CMQGCQXXXXXXXXXXXXXXXXXVPTLH---PSHHPNLQAYWHQ 297
+CI CQ S P C+QGC + P Q +HQ
Sbjct: 785 KCISDCQGLCKSNSPQCIQGCDASCQQLCGTAPTPAVPLTVNYNCNLPCDQQCTQQCYHQ 844
Query: 296 GPECAQVCPS 267
P CA C S
Sbjct: 845 APTCAPACAS 854
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -3
Query: 338 HPSHHPNLQAYWH--QGPECAQV-CPSPRV 258
HP HHP+LQ ++H Q A CPS V
Sbjct: 1620 HPPHHPHLQNHYHPPQNHTSATAPCPSAMV 1649
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -3
Query: 338 HPSHHPNLQAYWH--QGPECAQV-CPSPRV 258
HP HHP+LQ ++H Q A CPS V
Sbjct: 1781 HPPHHPHLQNHYHPPQNHTSATAPCPSAMV 1810
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 323 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 216
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 222 TTNPQSPTRKTRNPRTGTNLSTFRTLMP-VSLKIGMMRWMESGNHL*STTPTT 377
TT P +PT T P T T T T P + + E+ +TTPTT
Sbjct: 75 TTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTT 127
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 120 STMRRLNLVN*KPTGTSYLRRRSRIQKQRNLKIGTTNPQSPTRKTRNP 263
ST RR++L + K YL+ I+++R K Q+ + +NP
Sbjct: 100 STWRRISLASEKCVTNRYLKTDDEIEEKRARKKAKLEEQNRKEQAKNP 147
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 159 TGTSYLRRRSRIQKQRNLKIGT 224
+ ++Y+RR++R ++QRN IGT
Sbjct: 1038 SASAYIRRKNRERRQRNRTIGT 1059
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 159 TGTSYLRRRSRIQKQRNLKIGT 224
+ ++Y+RR++R ++QRN IGT
Sbjct: 1079 SASAYIRRKNRERRQRNRTIGT 1100
>L23649-3|AAA27909.2| 601|Caenorhabditis elegans Tyrosinase protein
1 protein.
Length = 601
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/50 (24%), Positives = 21/50 (42%)
Frame = +2
Query: 401 IDNPAYKGPWIHPEIDNPEYTPDSNLYKRDEICSVGLDLWQVKSGTIFNN 550
+ P + P+ P TP SN Y D C+ + ++ T++ N
Sbjct: 455 VQQPQQQPQQQQPQQQRPATTPQSNCYNEDPCCNQWSRQNECRTNTVYMN 504
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 323 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 216
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 323 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 216
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical
protein Y20F4.2 protein.
Length = 473
Score = 27.5 bits (58), Expect = 7.3
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -3
Query: 341 LHPSHHPNLQAYWHQGPECAQ-VCPSPRVSCLPGRGLWVCRPNLQVSLLLDP*SSSEVGS 165
+HP HH Q +HQ P Q P P P + Q S L P S+ GS
Sbjct: 192 MHPHHHQQQQMAFHQMPHYLQNSMPGPSGMMAPN------SQSQQHSPQLTP-QGSQQGS 244
Query: 164 PSRLLIHQIQP 132
P + + HQI P
Sbjct: 245 PVQ-MHHQIPP 254
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 177 RRRSRIQKQRNLKIGTTNPQSPTRKTRNPRTGT 275
R R R +K NLK T P++P +++R+ R+G+
Sbjct: 111 RARGRPRKATNLKSQLTTPRTPEKQSRS-RSGS 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,717,881
Number of Sequences: 27780
Number of extensions: 276651
Number of successful extensions: 892
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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