Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F20
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   3.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   5.0  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   6.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.8  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   8.8  

>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 147 FISGDTAFHEM 115
           FISG ++FHEM
Sbjct: 29  FISGTSSFHEM 39


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 126 KRYHPK*NVSRYNQP 170
           K +HP+  V+ YN P
Sbjct: 150 KNFHPRCAVNNYNDP 164


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 457 GNDDKNKPGEDNKSAE 504
           G ++KNK G+DN   E
Sbjct: 102 GFNNKNKDGDDNNDYE 117


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 492 VVFTGFVFIIISFINGGG 439
           V+  GF+F+I+ F++  G
Sbjct: 25  VLLVGFLFLILIFLSVAG 42


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 561 SKYIVPEVGDSLDIRIHPGLSRL 493
           S Y++ E G  +DI    GL+ L
Sbjct: 342 SGYLIDEYGKKIDIYTPEGLNML 364


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 561 SKYIVPEVGDSLDIRIHPGLSRL 493
           S Y++ E G  +DI    GL+ L
Sbjct: 342 SGYLIDEYGKKIDIYTPEGLNML 364


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 448 INEGNDDKNKPGEDNKSAEPRMDPNVKGIP 537
           IN+   DK + G D +   P ++ ++ G+P
Sbjct: 178 INQNMGDKVEIGIDLREYYPSVEWDILGVP 207


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,317
Number of Sequences: 438
Number of extensions: 3433
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)