Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F19
         (607 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium f...    34   3.0  
UniRef50_A0BD51 Cluster: Chromosome undetermined scaffold_10, wh...    33   6.9  
UniRef50_Q8IHP1 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_Q7RBG4 Cluster: Unnamed protein product; n=4; Plasmodiu...    32   9.2  
UniRef50_O96204 Cluster: Putative uncharacterized protein PFB055...    32   9.2  

>UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium
           falciparum|Rep: DEAD-box helicase 10 - Plasmodium
           falciparum
          Length = 899

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = -2

Query: 567 LFCGNTYIFHFNNKCRKHFLIKAKMQNLINFV-NFPQS--KINRDVLSKWQHYMTFSNTS 397
           +  GNT I HF   C  +FL K+  ++++NF+ N  Q+  K N  ++ K       + TS
Sbjct: 768 IILGNTIINHFKKFCIPNFL-KSVGKDILNFLHNHMQTIVKSNNTLMEKGTSAFLCTITS 826

Query: 396 FVCFKMNLRTI 364
           F     NLR+I
Sbjct: 827 FYSTSKNLRSI 837


>UniRef50_A0BD51 Cluster: Chromosome undetermined scaffold_10, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_10,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 892

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = -1

Query: 442 CSFQMATLYDVL*HILCLFQNEPTNNNLLKITFIHQYYRSYSFSKTIYI-LLEYLK 278
           C+FQ++   D + H+L   +      N  K+TFI+QY  + + SK + + + EYL+
Sbjct: 368 CAFQLSYSLDTIGHLLQQLKKTSEQINK-KLTFINQYMHNKNISKDLQVQVREYLQ 422


>UniRef50_Q8IHP1 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1429

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = -2

Query: 567  LFCGNTYIFHFNNKCRKHFLIKAKMQNLINFVNFPQSKINRDVLSKWQHYMTF 409
            LFC   + F++  KC K  L+  KM+N + +    Q KI+   LS  Q+ + F
Sbjct: 1356 LFCERPFQFNYLEKCSKELLVN-KMKNGLTYPKINQ-KISNATLSYIQYLLNF 1406


>UniRef50_Q7RBG4 Cluster: Unnamed protein product; n=4; Plasmodium
           (Vinckeia)|Rep: Unnamed protein product - Plasmodium
           yoelii yoelii
          Length = 794

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = +1

Query: 406 RERHIVLPFGKNISIYF*LWKIYKINQVLHFCLN*KMFPAFIIKMKNISISTK*IERTKN 585
           +E +IV P+ KNI  +  LW++ + + VL + ++ +  P F    K + I  K +++ K 
Sbjct: 295 KEGYIVTPYEKNIEYWKQLWRVIEKSHVLFYIIDARN-PLFFYS-KGLDIYVKKVDKRKE 352

Query: 586 MV 591
            +
Sbjct: 353 FI 354


>UniRef50_O96204 Cluster: Putative uncharacterized protein PFB0555c;
           n=4; Plasmodium|Rep: Putative uncharacterized protein
           PFB0555c - Plasmodium falciparum (isolate 3D7)
          Length = 4091

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
 Frame = -2

Query: 585 VFGTFDLFCGNTYIFHFNNKCRKHFLIKAKMQNLIN-FVNFPQSKI-----NRDVLSKWQ 424
           +F    ++C N +++    + R + L ++ +++ ++ F+ FP+  +     N D+++   
Sbjct: 250 LFLNIQIYCINIFLYL---QLRLNILSQSNIKSYLHIFLTFPKLSLSNTYMNEDIITSTL 306

Query: 423 HYMTFSNTSFVCFKMNLRTIIC*K*HSYINTIDPILLVKLYIFF 292
               +S   F+C   N+ T      H Y+N    I L KL+ FF
Sbjct: 307 QQKEYSVIFFICSLCNIITYE--DIHKYVNCCLSINLFKLFFFF 348


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,671,146
Number of Sequences: 1657284
Number of extensions: 8424727
Number of successful extensions: 17713
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17629
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)