Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F18
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   295   1e-81
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   2.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.5  
DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        23   8.5  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  295 bits (723), Expect = 1e-81
 Identities = 138/204 (67%), Positives = 157/204 (76%)
 Frame = +3

Query: 45  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 224
           MGAYRY+QELYRKK SDVMR+LLR+R WQYRQ+TR HRAPRP RP + RRLGY+AK G+ 
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60

Query: 225 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 404
           IFRI               TYGKPKSHGVNQLKP R LQS+AEE            NSYW
Sbjct: 61  IFRIRVRCGGRKRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYW 120

Query: 405 VAQDSSYKYFEVILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRF 584
           VAQD+++KYFEVI++DP + AIRRDP +NWI NAVHKHRE+RGLTSAGKSSRGLGK +R+
Sbjct: 121 VAQDAAHKYFEVIMVDPPNNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGLGKAYRY 180

Query: 585 SQTKGGSRRAAWLRRNTLQLRRKR 656
           SQT GGSRRAA +RRN L LRR R
Sbjct: 181 SQTIGGSRRAAGVRRNRLHLRRYR 204


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 80  PIQLLYISVRAHLDESVNKNLSVY 9
           P +L+ ISV  H+DES N NL  Y
Sbjct: 404 PTKLIPISVLYHIDES-NVNLKKY 426


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 20  GSYS-QTRQDGRVQIYTGVV*EKVERC 97
           GS S Q   +GR Q   GV  EK +RC
Sbjct: 403 GSRSLQCNAEGRCQCKPGVTGEKCDRC 429


>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 337 CSLLLRSVLVAGVVVYACLIHTG*HRTLHTNTLKLF 444
           C ++++S + A V+   C I          +T KLF
Sbjct: 10  CIIIMKSFIAAAVIALICAIAVSGTTVTLQSTCKLF 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,318
Number of Sequences: 2352
Number of extensions: 14199
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)