Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F18
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   314   7e-86
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   314   7e-86
AY071382-1|AAL49004.1|  137|Drosophila melanogaster RE41492p pro...    30   3.2  
AE014298-2964|AAF45382.2|  137|Drosophila melanogaster CG12656-P...    30   3.2  
AY070969-1|AAL48591.1|  233|Drosophila melanogaster RE06857p pro...    29   7.4  
AE014298-2476|AAF48662.2|  233|Drosophila melanogaster CG4742-PA...    29   7.4  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  314 bits (771), Expect = 7e-86
 Identities = 147/204 (72%), Positives = 162/204 (79%)
 Frame = +3

Query: 45  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 224
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 225 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 404
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 405 VAQDSSYKYFEVILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRF 584
           +AQD+SYKYFEVILID  H AIRRDPKINWI   VHKHRE+RGLTSAGKSSRG+GKG+R+
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRY 180

Query: 585 SQTKGGSRRAAWLRRNTLQLRRKR 656
           SQT GGSRRAAW R+N   + RKR
Sbjct: 181 SQTIGGSRRAAWKRKNREHMHRKR 204


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  314 bits (771), Expect = 7e-86
 Identities = 147/204 (72%), Positives = 162/204 (79%)
 Frame = +3

Query: 45  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 224
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 225 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 404
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 405 VAQDSSYKYFEVILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRF 584
           +AQD+SYKYFEVILID  H AIRRDPKINWI   VHKHRE+RGLTSAGKSSRG+GKG+R+
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRY 180

Query: 585 SQTKGGSRRAAWLRRNTLQLRRKR 656
           SQT GGSRRAAW R+N   + RKR
Sbjct: 181 SQTIGGSRRAAWKRKNREHMHRKR 204


>AY071382-1|AAL49004.1|  137|Drosophila melanogaster RE41492p
           protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 24/87 (27%), Positives = 35/87 (40%)
 Frame = -1

Query: 269 HWAFTATTAHADSEDNITLLGTVSKPSRLVWPRGPGSAVHTSQLAILPHSYTQEKSHNIA 90
           H   T  +A A +   +T   +  + S   +PR   +    S    L  S  Q      A
Sbjct: 50  HITHTTPSATATANAKVTGWASARRTSVSAFPRSTSTVSQNSVFFFLLLSAAQLYDEICA 109

Query: 89  QLFPIQLLYISVRAHLDESVNKNLSVY 9
            +F  QL+YI   A  +ES +K L  Y
Sbjct: 110 NMFIYQLVYILKLAMNNESESKLLKSY 136


>AE014298-2964|AAF45382.2|  137|Drosophila melanogaster CG12656-PA
           protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 24/87 (27%), Positives = 35/87 (40%)
 Frame = -1

Query: 269 HWAFTATTAHADSEDNITLLGTVSKPSRLVWPRGPGSAVHTSQLAILPHSYTQEKSHNIA 90
           H   T  +A A +   +T   +  + S   +PR   +    S    L  S  Q      A
Sbjct: 50  HITHTTPSATATANAKVTGWASARRTSVSAFPRSTSTVSQNSVFFFLLLSAAQLYDEICA 109

Query: 89  QLFPIQLLYISVRAHLDESVNKNLSVY 9
            +F  QL+YI   A  +ES +K L  Y
Sbjct: 110 NMFIYQLVYILKLAMNNESESKLLKSY 136


>AY070969-1|AAL48591.1|  233|Drosophila melanogaster RE06857p
           protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 541 PQGKALVVSARDIASLKPREVPVAPPGYVATPCNCVAS 654
           PQG AL+ SA D +S+ P   PV+PP   +   +  AS
Sbjct: 16  PQGAALLRSA-DSSSISPAISPVSPPALQSKSLHTAAS 52


>AE014298-2476|AAF48662.2|  233|Drosophila melanogaster CG4742-PA
           protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 541 PQGKALVVSARDIASLKPREVPVAPPGYVATPCNCVAS 654
           PQG AL+ SA D +S+ P   PV+PP   +   +  AS
Sbjct: 16  PQGAALLRSA-DSSSISPAISPVSPPALQSKSLHTAAS 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,757,628
Number of Sequences: 53049
Number of extensions: 621801
Number of successful extensions: 1855
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1855
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)