Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_F17
(282 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 38 0.001
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 38 0.001
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 33 0.034
06_03_0876 - 25593744-25594046,25594747-25594902,25594986-255950... 33 0.045
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 0.18
03_05_0261 - 22470565-22470714,22472101-22474270,22474368-224745... 31 0.18
08_01_0191 + 1590948-1591607,1591694-1592176,1592449-1592451,159... 29 0.55
02_05_1273 + 35381626-35382486,35382567-35382691,35384851-353854... 29 0.55
08_02_1544 + 27787089-27787172,27787448-27787612,27787741-277878... 28 1.3
06_01_0768 + 5742938-5743196,5743291-5744729 28 1.3
03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,200... 27 1.7
08_02_0802 + 21386248-21387468 27 2.2
08_01_0606 - 5321751-5321819,5321950-5322192,5322279-5322377,532... 27 2.2
10_07_0104 - 12907816-12908301 27 3.0
09_02_0116 + 4420808-4421323,4421367-4421918 27 3.0
08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991 27 3.0
04_04_1683 + 35345506-35345581,35346171-35346343,35346706-353467... 27 3.0
04_03_0589 - 17604361-17604800,17604887-17604949,17605025-176052... 27 3.0
12_02_1005 + 25235757-25235915,25236258-25236374,25236467-252365... 26 3.9
09_03_0041 + 11826788-11828002,11828101-11828563,11828668-118287... 26 3.9
02_04_0107 - 19804730-19805044 26 3.9
09_04_0526 + 18332915-18333605,18335044-18335242,18335914-18336751 26 5.2
08_01_0337 - 2994086-2995489 26 5.2
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 26 5.2
05_07_0053 - 27364449-27365021,27365117-27365352,27365993-27367880 26 5.2
04_03_0306 + 14136338-14136686,14137408-14137442,14137701-141377... 26 5.2
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619 26 5.2
09_04_0211 - 15656614-15657186 25 6.8
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 25 6.8
08_02_0723 - 20422219-20423796 25 6.8
08_02_0580 - 18953208-18953513,18953668-18953868,18953929-189540... 25 6.8
05_01_0533 + 4594169-4595065,4598375-4598983 25 6.8
04_03_0771 + 19434460-19434987 25 6.8
03_02_0894 + 12226006-12226484,12226601-12226709 25 6.8
11_01_0096 - 719749-719851,719957-720074,720562-720922 25 9.0
09_06_0249 - 21853325-21853484,21853523-21853902,21854012-21854185 25 9.0
09_06_0149 - 21222976-21223065,21223460-21224173 25 9.0
09_03_0089 + 12265916-12267232 25 9.0
08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128 25 9.0
08_02_1212 - 25325911-25327047 25 9.0
07_03_1551 + 27646445-27647096,27647229-27647374 25 9.0
07_03_0604 + 19903654-19904598 25 9.0
04_04_1397 - 33230416-33230742,33230852-33231007,33231130-332315... 25 9.0
04_04_1207 + 31734940-31735500,31736565-31736683,31736791-317373... 25 9.0
03_02_0760 + 10960381-10960461,10960740-10961003,10961334-109616... 25 9.0
02_05_0006 - 24897409-24897922,24898041-24898303 25 9.0
02_04_0033 + 19069801-19070142 25 9.0
01_06_0796 - 32064177-32064223,32064342-32064423,32064899-320649... 25 9.0
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 25 9.0
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 121 KGPKAFISLPGGKGVRLTIAEERDKRIAAKVA 216
KG K ++SLP GKG++L+I EE+ KR AA A
Sbjct: 230 KGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQA 261
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 121 KGPKAFISLPGGKGVRLTIAEERDKRIAAKVA 216
KG K ++SLP GKG++L+I EE+ KR AA A
Sbjct: 230 KGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQA 261
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 33.1 bits (72), Expect = 0.034
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 121 KGPKAFISLPGGKGVRLTIAEERDKRIAAKVA 216
K K ++SLP GKG++L+I EE KR A A
Sbjct: 246 KERKPWVSLPKGKGIKLSIIEEARKRNAEAAA 277
>06_03_0876 -
25593744-25594046,25594747-25594902,25594986-25595095,
25595429-25595520,25595613-25595657,25595775-25595920,
25596027-25596114,25596251-25596281,25596388-25596413,
25596617-25596939
Length = 439
Score = 32.7 bits (71), Expect = 0.045
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 125 AQRRSSPFPAGR--ECASPSRKSGTSASQRRSPDSSATYT 238
A SS FP G+ +SPSR S +S S RRS ++AT T
Sbjct: 397 AAAASSGFPMGQVATASSPSRPSSSSCSSRRSSTAAATAT 436
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 0.18
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +2
Query: 2 SGTKAQAPPGLPFEFLPLQGTSPGPPFPNRVNQVVH*FGQRAQRRSSPFP---AGRECAS 172
+G KA APP P + GT P PP + + H + +P P GRE
Sbjct: 757 TGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPPSSKGLNAPAPPPLLGRGREATG 816
Query: 173 PSRKSGTSASQRRSPDSSAT 232
++ G +Q+ +P A+
Sbjct: 817 SAKGRGIGLAQQSNPPKKAS 836
>03_05_0261 -
22470565-22470714,22472101-22474270,22474368-22474540,
22474763-22474924,22476420-22476560
Length = 931
Score = 30.7 bits (66), Expect = 0.18
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 65 SPGPPFPNRVNQVVH*FGQRAQRRSSPFPAGRECASPSRKSGTSASQRRSPDSSATYTLI 244
SP PP P QV G A+ +SP P+ R SP+R SG SA + S + L
Sbjct: 4 SPPPPHPTPPEQVGD--GVEARSCASPTPSLRRKGSPNR-SGGSARKSSSSREFGSSILN 60
Query: 245 NIN 253
++N
Sbjct: 61 SVN 63
>08_01_0191 +
1590948-1591607,1591694-1592176,1592449-1592451,
1592555-1592992
Length = 527
Score = 29.1 bits (62), Expect = 0.55
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 113 FG-QRAQRRSSPFPAGRECASPSRKSGTSASQRRSP 217
FG R + R F G+E A S KSG +A +RRSP
Sbjct: 480 FGVSREEARMVKFGRGQELAIFSPKSGAAARRRRSP 515
>02_05_1273 +
35381626-35382486,35382567-35382691,35384851-35385450,
35385550-35385841,35386199-35386364,35386664-35386707,
35386866-35386979,35387171-35387290,35387541-35387626,
35388340-35388502
Length = 856
Score = 29.1 bits (62), Expect = 0.55
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 78 RSRTGLTKLFINSGKGPKGVHLPSRREGSAPHHRGRAGQAHRSEGRR 218
R R L + ++ P+ + SRR+ +A R R G+ R GR+
Sbjct: 203 RQRVRLVREWVQMASQPRDSRVASRRDDTAAGERERRGEPPRLRGRQ 249
>08_02_1544 +
27787089-27787172,27787448-27787612,27787741-27787850,
27788360-27788513,27788643-27788937,27788996-27789798
Length = 536
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 235 ISSATVRRPSLRCACPALP 179
++ A VRRP+ RC PALP
Sbjct: 10 VAVAAVRRPTRRCHLPALP 28
>06_01_0768 + 5742938-5743196,5743291-5744729
Length = 565
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 131 RRSSPFPAGRECASPSRKSGTSASQR 208
RR SPFP+ ASPSR + S+R
Sbjct: 65 RRGSPFPSMSGWASPSRMYASKGSKR 90
>03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,
2008214-2008693,2008806-2008904,2009097-2009218,
2009296-2009414,2009492-2009559,2009832-2010017,
2010323-2010425,2010477-2010556,2010638-2010694,
2010771-2010913,2010988-2011132,2011501-2011662,
2011759-2011944,2012273-2012365,2012893-2013053,
2013440-2013547,2013664-2013928
Length = 995
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +3
Query: 3 RARRRKRHPGFLSNSCHFKELPRGPRSRTGLTKLFINSGKGPKGVHLPSRREGSAPHHRG 182
R RK + S + + + RG + L F+ GPK +H+PS + S
Sbjct: 800 RGVERKDFNSYGSRRGNDEIMARGTFANIRLVNKFLKGEVGPKTIHIPSGEKLSV----F 855
Query: 183 RAGQAHRSEGRRTVAL 230
A +++EG T+ L
Sbjct: 856 DAATKYKNEGHDTIIL 871
>08_02_0802 + 21386248-21387468
Length = 406
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 123 GPKGVHLPSRREGSAPHHRGRAGQAHRS 206
GP+ V L SRRE A GR G+ HRS
Sbjct: 164 GPRPVLL-SRREHVAMRDAGRGGRGHRS 190
>08_01_0606 -
5321751-5321819,5321950-5322192,5322279-5322377,
5322463-5322942,5323069-5323167,5323306-5323427,
5323517-5323635,5323734-5323801,5323889-5324074,
5324169-5324244,5324339-5324418,5324505-5324561,
5324980-5325122,5325208-5325352,5325652-5325813,
5325893-5326078,5326263-5326355,5326437-5326597,
5327005-5327109,5328263-5328278
Length = 902
Score = 27.1 bits (57), Expect = 2.2
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 15 RKRHPGFLSNSCHFKELPRGPRSRTGLTKLFINSGKGPKGVHLPSRREGSAPHHRGRAGQ 194
RK + S + + + RG + + F+N GPK VH+P+ + + A
Sbjct: 711 RKDFNSYGSRRGNDEVMARGTFANIRIVNKFLNGEVGPKTVHVPTGEK----LYVFDAAL 766
Query: 195 AHRSEGRRTVAL 230
++SEG T+ L
Sbjct: 767 KYKSEGHDTIVL 778
>10_07_0104 - 12907816-12908301
Length = 161
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 253 IYIN*RISSATVRRPSLRCACPALPRW*GALPSRR 149
++ + R +A RR + C CPA RW G + R
Sbjct: 113 VFTDGRTRAARWRRSASGCRCPAARRWSGRWSAAR 147
>09_02_0116 + 4420808-4421323,4421367-4421918
Length = 355
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 144 PSRREGSAPHHRGRAGQAHRSEGRRTVALL 233
P+ S HHR R G+ S+GR VA L
Sbjct: 219 PAAMWDSTSHHRYRVGEMPASDGRLCVASL 248
>08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991
Length = 1165
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 8 TKAQAPPGLPFEFLPLQGTSPGPPFPNR--VNQVVH*FGQRAQRRSS 142
T A G+P F +G P P PNR +N ++ +G+R + R +
Sbjct: 11 TTAALAAGVPHRFPAPEGEPPPPRGPNRAHLNALLTSYGRRGRLRDA 57
>04_04_1683 +
35345506-35345581,35346171-35346343,35346706-35346739,
35346919-35347055,35347356-35347422,35347645-35347744,
35348375-35348538,35349023-35349069,35349177-35349224,
35349463-35349976,35350190-35350278,35350472-35350549,
35350972-35351019
Length = 524
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 17 QAPPGLPFEFLPLQGTSPGPP-FPNRVNQV 103
Q+ G+PF F P G SP P F N +N+V
Sbjct: 299 QSSSGVPFTFFP-PGNSPTPEFFANIINRV 327
>04_03_0589 -
17604361-17604800,17604887-17604949,17605025-17605280,
17605373-17605634,17605739-17605885,17606118-17606236,
17606373-17606531,17606911-17606947,17607023-17607174
Length = 544
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 PGLPFEFLPLQG-TSPGP-PFPNRVNQVVH*FGQRAQRRSSPFPA 154
P PF + G P P PFP V VH + ++ Q+ + +PA
Sbjct: 175 PHAPFRVMRQFGFRQPFPVPFPTTVPAAVHRYSRKGQQSAGDWPA 219
>12_02_1005 +
25235757-25235915,25236258-25236374,25236467-25236535,
25237509-25237964
Length = 266
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 14 AQAPPGLPFEFLPLQGTSPGPPFP 85
A PPG P +P P PP+P
Sbjct: 195 AAPPPGPPATMMPFGAMLPYPPYP 218
>09_03_0041 +
11826788-11828002,11828101-11828563,11828668-11828798,
11829227-11829577,11829723-11829879,11829968-11830260,
11830367-11830426,11830530-11830619,11830774-11830857
Length = 947
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 50 PLQGTSPGPPFPNRVNQVVH*FGQRAQRRSSPFPAGRECASPSRKSGTSA 199
P SP PPFP+ + +RA ++ AG +SPS S A
Sbjct: 8 PPHALSPKPPFPSTLRSTRSLRLRRATAAAAAAGAGVSSSSPSTSSPEKA 57
>02_04_0107 - 19804730-19805044
Length = 104
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 171 HHRGRAGQAHRSEGRRTVAL 230
HH+GR G R +GRR ++
Sbjct: 44 HHQGRRGHRRRCQGRRAPSI 63
>09_04_0526 + 18332915-18333605,18335044-18335242,18335914-18336751
Length = 575
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 17 QAPPGLPFEFLPLQGTSPGPPFPNRVN 97
QA +PF PL P P FP++VN
Sbjct: 407 QAQHDMPFHPRPLVPAYPQPHFPSQVN 433
>08_01_0337 - 2994086-2995489
Length = 467
Score = 25.8 bits (54), Expect = 5.2
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 220 VRRPSLRCACPALPR-W*GALPSRREGR*TPLGPLPELMNNLVNPVRERGPRG 65
+RR +L CP LPR G R+G LP + + L P R R G
Sbjct: 126 LRRATLCARCPRLPRPRRGRCSGDRDGALPVRDALPPVAHVLRRPPRRRAGEG 178
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 25.8 bits (54), Expect = 5.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 122 RAQRRSSPFPAG---RECASPSRKSGTSASQRRSPDSSATYT 238
R+ R S P G R ++P +SG S R+P +SA T
Sbjct: 92 RSSRTPSAAPGGTSARGSSTPGGRSGRGTSPARAPSTSAPST 133
>05_07_0053 - 27364449-27365021,27365117-27365352,27365993-27367880
Length = 898
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 122 FARINEQLG*PCSGTGAPGKFLEVARIRK--EARVALAP 12
++R+NE PC P L++ARI K EA V L P
Sbjct: 764 WSRVNELSILPCGNRSTPMMRLKLARILKGVEATVELQP 802
>04_03_0306 +
14136338-14136686,14137408-14137442,14137701-14137778,
14138046-14138124,14138731-14138823,14139472-14139556,
14140270-14140345,14140669-14140794,14141039-14141137,
14141238-14141339,14141561-14141671,14141809-14141904,
14142488-14142539,14142624-14142735,14142879-14142943,
14144124-14144521,14145236-14145330,14145989-14146015,
14146081-14146156,14146368-14146421,14146741-14146863,
14146955-14147023
Length = 799
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +2
Query: 122 RAQRRSSPFPAGRECASPSRKSG---TSASQRRSPDSSAT 232
++ ++ SP+ G++ + KSG TS +R D SAT
Sbjct: 542 KSNKKQSPYSTGKDNGKSNTKSGKASTSFHTQRRTDKSAT 581
>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
Length = 398
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 117 GKGPKGVHLPSRREGSA 167
G+ P+G +LP+RR GS+
Sbjct: 2 GRSPRGRNLPARRRGSS 18
>09_04_0211 - 15656614-15657186
Length = 190
Score = 25.4 bits (53), Expect = 6.8
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 15 RKRHPGFLSNSCHFKELPRGPRSRTGLTKLFINSGKGPKGVHLPSRREGSA-PHHRGRAG 191
R+R G + +E R + L ++S G + V R E HH GR G
Sbjct: 98 RRRGGGRSISVVERRESSRSSATTWSSPPLILSSSVGRELVAAAGREERPVGAHHSGREG 157
Query: 192 QAHRSEGR 215
HR R
Sbjct: 158 ACHRHHRR 165
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 25.4 bits (53), Expect = 6.8
Identities = 22/75 (29%), Positives = 26/75 (34%)
Frame = +2
Query: 2 SGTKAQAPPGLPFEFLPLQGTSPGPPFPNRVNQVVH*FGQRAQRRSSPFPAGRECASPSR 181
S ++A PP E P P PP P H + A PA R S
Sbjct: 64 SPSRAPPPPPSHHERAPSDAPPPPPPAPYAGGSPYH---RHAAGGGETPPARRGGGRTSG 120
Query: 182 KSGTSASQRRSPDSS 226
G+S S SP S
Sbjct: 121 GGGSSYSVEHSPSPS 135
>08_02_0723 - 20422219-20423796
Length = 525
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +3
Query: 117 GKGPKGVHLP---SRREGSAPHHRGRAGQAHRSEGR 215
G P GV RR HHRG + +HR++GR
Sbjct: 404 GDNPAGVSYMVGYGRRFPRRVHHRGASMVSHRADGR 439
>08_02_0580 -
18953208-18953513,18953668-18953868,18953929-18954009,
18954096-18954410,18954493-18954636,18954733-18954822,
18954907-18954983,18955122-18955182,18955264-18955490,
18955581-18955740,18955825-18956025,18956114-18956209,
18956380-18956565,18956641-18956810,18957044-18957275,
18958652-18959029
Length = 974
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 4 GHEGASATRASFRILATSRNFPGAPVPEQ 90
G GA + R + + A RN PG P+P +
Sbjct: 97 GGGGAGSARVAGIVEAIRRNNPGRPIPAE 125
>05_01_0533 + 4594169-4595065,4598375-4598983
Length = 501
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 102 LFINSGKGPKGVHLPSRREGSAPHHRGR 185
L + G G PS+RE +A HH R
Sbjct: 374 LIVTGGGANGGARCPSKREVAAQHHELR 401
>04_03_0771 + 19434460-19434987
Length = 175
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 147 SRREGSAPHHRGRAGQAHRSEGRRTVALLIR 239
+R E HHRGRAG E RR +L R
Sbjct: 79 TREEAEHGHHRGRAG----GEARRHTVVLSR 105
>03_02_0894 + 12226006-12226484,12226601-12226709
Length = 195
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 99 KLFINSGKGPKGVHLPSRREGSAPHHRGRAGQAHRSEGRR 218
K+ I+ P G HLPS +G + H+ +EG R
Sbjct: 62 KICIHHLHSPAGTHLPSPLDGDSEIHKTVTTSCGWAEGLR 101
>11_01_0096 - 719749-719851,719957-720074,720562-720922
Length = 193
Score = 25.0 bits (52), Expect = 9.0
Identities = 20/66 (30%), Positives = 25/66 (37%)
Frame = +2
Query: 23 PPGLPFEFLPLQGTSPGPPFPNRVNQVVH*FGQRAQRRSSPFPAGRECASPSRKSGTSAS 202
PP P L SP PP+P+ V + Q+R +G CA S S
Sbjct: 30 PPEPPLAS-DLPARSPPPPYPSARILVDEELRREMQKRGRAAWSGEGCAGRSGTEVGRES 88
Query: 203 QRRSPD 220
RR D
Sbjct: 89 GRRRVD 94
>09_06_0249 - 21853325-21853484,21853523-21853902,21854012-21854185
Length = 237
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -2
Query: 170 RRTPFPPGREMNAFGPFARINEQLG*PCSGTGAPGKFLEVARIRKEARVALAPSCP 3
RR P+PP + +FG R EQ + GA + ++V + A P P
Sbjct: 53 RRPPYPPPKAFKSFGVEDRPGEQWVRLRATRGAQDEEVKVDATMFDGAAAPPPDAP 108
>09_06_0149 - 21222976-21223065,21223460-21224173
Length = 267
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 20 APPGLPFEFLPLQGTSPGPPFP 85
AP LP LPL G P PP P
Sbjct: 102 APAVLPSAALPLLGERPPPPPP 123
>09_03_0089 + 12265916-12267232
Length = 438
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 53 LQGTSPGPPFPNRVNQVVH*FGQRAQRRSSPFP--AGRECASPSRKSGTSASQRRSPDSS 226
L+ + G P + ++ F Q+ +SPFP ++P S S+S + +++
Sbjct: 199 LRSAAAGDPASSLPPYLLRPFAQKLPTAASPFPPYTSSSSSTPLSTSTPSSSNLAAANAN 258
Query: 227 ATYT 238
AT T
Sbjct: 259 ATTT 262
>08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128
Length = 1226
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 42 NSCHFKELPRGPRSRTGLTKLFINSGKGPKGV 137
N+C +EL GP TGLT L + + + K V
Sbjct: 1123 NACEEEELCFGPERFTGLTSLELLNWESLKSV 1154
>08_02_1212 - 25325911-25327047
Length = 378
Score = 25.0 bits (52), Expect = 9.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 5 GTKAQAPPGLPFEFLPLQGTSPGPPFPNRVNQVVH*FGQRAQRRSSPFPAGR 160
G+ A+AP L EF L G P F + + F RSSP P +
Sbjct: 80 GSPARAPFSLAAEFNLLSGNPGSPAFFLLLKPRLGDFSLSHTLRSSPHPGNK 131
>07_03_1551 + 27646445-27647096,27647229-27647374
Length = 265
Score = 25.0 bits (52), Expect = 9.0
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 8 TKAQAPPGLPFEFLPLQGTSPGPPFPNRVNQVVH*FGQRAQRRSSPFPAGRECASPSRKS 187
T A APP P P + T+ + ++ ++ GQRA++ +SP P A+ R +
Sbjct: 39 TSADAPPPPP----PTRQTAGVDRLISFLSSLIPRRGQRAKQPTSPPPTAAAAAAMRRAA 94
Query: 188 GTSASQRR 211
A R
Sbjct: 95 EREAEAER 102
>07_03_0604 + 19903654-19904598
Length = 314
Score = 25.0 bits (52), Expect = 9.0
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 102 LFINSGKGPKGVHLPSRREGSAPHHRGRAGQAHRSEGRRTVALLIR 239
L + K P G RR AP HR R HR RR V + +R
Sbjct: 72 LGLTVSKAPGGRRRRPRRVEGAPVHRARR-LHHRRVRRRRVHVAVR 116
>04_04_1397 -
33230416-33230742,33230852-33231007,33231130-33231543,
33234177-33234307,33235076-33235202,33235709-33236209,
33237624-33237935,33238690-33238719
Length = 665
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 158 RECASPSRKSGTSASQRRSPDSS 226
R CAS + SG+S+ R DSS
Sbjct: 180 RPCASETETSGSSSKSRTCSDSS 202
>04_04_1207 +
31734940-31735500,31736565-31736683,31736791-31737318,
31738256-31738354,31739768-31739909
Length = 482
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 9 RRRKRHPGFLSNSCHFKELPRGPRSR 86
+RRK GFL K+L GP+ R
Sbjct: 299 KRRKAEGGFLGADVILKQLQEGPKIR 324
>03_02_0760 +
10960381-10960461,10960740-10961003,10961334-10961619,
10961637-10962394
Length = 462
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 116 GQRAQRRSSPFPAGRECASPSRKSGTSASQRRS 214
G+ SSP PA + ASP + SA Q R+
Sbjct: 6 GKAKAALSSPLPARQHAASPGQVPLCSAEQSRA 38
>02_05_0006 - 24897409-24897922,24898041-24898303
Length = 258
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 83 PNRV-NQVVH*FGQRAQRRSSPFPA-GRECASPSRKSGTSAS 202
P R N++ + + ++R P P+ GRE A+P RK+ A+
Sbjct: 97 PGRTDNEIKNVWHTHLKKRLEPKPSSGREAAAPKRKATKKAA 138
>02_04_0033 + 19069801-19070142
Length = 113
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 57 KELPRGPRSRTGLTKLFINSGKGPKGVHLPSRREGSAPHHRG 182
+E P R LT + GP+G R +AP RG
Sbjct: 12 REAAAQPLGRETLTSPCATAASGPRGRGRGEREAAAAPRRRG 53
>01_06_0796 -
32064177-32064223,32064342-32064423,32064899-32064948,
32065055-32065319
Length = 147
Score = 25.0 bits (52), Expect = 9.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 47 LPLQGTSPGPPFPNRVNQVVH*FGQRAQRRSSPFPAGRECASPSRKSGTSASQRRSPDSS 226
LP G PG P R + G RR++P PAGR + + ++A+ + +S
Sbjct: 11 LPGSGPLPGLAVPGR-GDLFPAAGSVVGRRAAPAPAGRGAVARAVDGPSAAAAVAAAAAS 69
Query: 227 A 229
A
Sbjct: 70 A 70
>01_01_0562 +
4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 141 LPSRREGSAPHHRGRAGQAHRSEGRR 218
LP+ EGS H G G +R++ RR
Sbjct: 229 LPAPSEGSPKRHSGEEGIDYRTKTRR 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,584,945
Number of Sequences: 37544
Number of extensions: 205811
Number of successful extensions: 859
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 279801164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -