Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F16
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.88 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    24   1.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 277 GIFFLIIEINYNSLCASLRIAASPWIAREFSYSIIIS 387
           GI FL++     +LC  L++  + W+  +  Y I +S
Sbjct: 881 GISFLLVTQTIFALCVVLQLQENDWL--QLGYLIFVS 915


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 83  PLHAGGGLNVDRFESWRSSSSAVVVPR 3
           P H G G  V+RF S R  ++ V  PR
Sbjct: 217 PKHDGRGRIVERFTSDRVHAALVTSPR 243


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -2

Query: 297 NYQKEYAHVRNSNGGSYSAGISGELPSLSILSIFRLTL 184
           +Y     + R++ GG+ ++  SG+  S S+    R +L
Sbjct: 333 HYTASSKNYRSATGGNSASNSSGDAQSTSLRPFSRWSL 370


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 318 MCFVKNSCITLDSS 359
           MC +KN  + LDSS
Sbjct: 1   MCQIKNKLLLLDSS 14


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 46  NRSTLRPPPACKGVFRCLSCKNGNAE 123
           N S   P     G ++C++CK  N +
Sbjct: 857 NGSEYHPSIVSLGEYKCVTCKCENGK 882


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,671
Number of Sequences: 336
Number of extensions: 2845
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)