Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F14
         (580 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar...    99   4e-20
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary...    89   5e-17
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta...    80   4e-14
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R...    63   4e-09
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo...    46   6e-04
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu...    46   9e-04
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar...    45   0.001
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;...    39   0.074
UniRef50_Q8D2J6 Cluster: YnhC protein; n=1; Wigglesworthia gloss...    32   8.5  
UniRef50_Q4AE86 Cluster: RhopH1/Clag2; n=7; Plasmodium falciparu...    32   8.5  

>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
           Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
           melanogaster (Fruit fly)
          Length = 204

 Score =   99 bits (238), Expect = 4e-20
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = +1

Query: 10  AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
           AIRRDPKINWI   VHKHRE+RGLTSAGKSSRG+GKG+R+SQT GGSRRAAW
Sbjct: 141 AIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAW 192


>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
           Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
           (Human)
          Length = 204

 Score = 89.4 bits (212), Expect = 5e-17
 Identities = 39/52 (75%), Positives = 42/52 (80%)
 Frame = +1

Query: 10  AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
           AIRR+P   WI   VHKHREMRGLTSAG+ SRGLGKGH+F  T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192


>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
           Eumetazoa|Rep: 60S ribosomal protein L15 -
           Caenorhabditis elegans
          Length = 204

 Score = 79.8 bits (188), Expect = 4e-14
 Identities = 35/52 (67%), Positives = 39/52 (75%)
 Frame = +1

Query: 10  AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
           AIRR+P   WI   VHKHRE RGLTSAG+ SRGLGKG RFS T+GGS+   W
Sbjct: 141 AIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNW 192


>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
           Ribosomal protein L15 - Oryza sativa subsp. indica
           (Rice)
          Length = 438

 Score = 63.3 bits (147), Expect = 4e-09
 Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = +1

Query: 1   ARGAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGL-GKGHRFSQTKGGSRRAAW 165
           A  AIR D +INW+   VHKH E+ GLTSAG   RGL GKGH   + +  S RA W
Sbjct: 371 AHSAIRDDLRINWLCKPVHKHGELHGLTSAGNKYRGLRGKGHTHHKARPSSPRATW 426


>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
           Thermoprotei|Rep: 50S ribosomal protein L15e -
           Sulfolobus acidocaldarius
          Length = 217

 Score = 46.0 bits (104), Expect = 6e-04
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +1

Query: 13  IRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQT 138
           IR DP++ W+ ++V++ R  RGLTSAG+ SRGL K      T
Sbjct: 140 IRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGLTKSRGLKGT 181


>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
           organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
           horikoshii
          Length = 194

 Score = 45.6 bits (103), Expect = 9e-04
 Identities = 24/39 (61%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +1

Query: 13  IRRDPKINWIVNAVHKHREMRGLTSAGKSSRGL---GKG 120
           I+ DPKI WI    HK R  RGLTSAGK  RGL   GKG
Sbjct: 140 IKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKG 178


>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
           Euryarchaeota|Rep: 50S ribosomal protein L15e -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 196

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
 Frame = +1

Query: 7   GAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGL---GKG 120
           GAI+ D  +NWI +  HK+R  RG TSAG+ +RGL   GKG
Sbjct: 140 GAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKG 180


>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
           Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
           L15E - Ignicoccus hospitalis KIN4/I
          Length = 245

 Score = 39.1 bits (87), Expect = 0.074
 Identities = 18/36 (50%), Positives = 22/36 (61%)
 Frame = +1

Query: 10  AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGK 117
           AI  DP++ WI    H+ R  RG TSAG+  RGL K
Sbjct: 161 AICSDPELKWICEKQHRGRVFRGKTSAGRKMRGLLK 196


>UniRef50_Q8D2J6 Cluster: YnhC protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           YnhC protein - Wigglesworthia glossinidia brevipalpis
          Length = 431

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = +2

Query: 278 NKIYFYLYYTKFLFQTSCSPRFYPRSSREIFVIQNYPMSLSGFQTIFIS 424
           NK + ++   KF  +  C PR    SS++   ++NY +++S ++ IFI+
Sbjct: 51  NKYFKFINIEKFFNEIICYPRI---SSKDYIDLKNYLLNISSYKLIFIN 96


>UniRef50_Q4AE86 Cluster: RhopH1/Clag2; n=7; Plasmodium
            falciparum|Rep: RhopH1/Clag2 - Plasmodium falciparum
          Length = 1440

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 248  FIFKWKADVPNKIYFYLYYTKFLFQTSCSPRFYPRSSRE 364
            F F WK+D P  +YFY +   +L      P  +  S +E
Sbjct: 1158 FFFNWKSDAPIYLYFYFFSNLYLDSAKYFPGGFSTSLKE 1196


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,404,046
Number of Sequences: 1657284
Number of extensions: 11230003
Number of successful extensions: 31020
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 30020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31011
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)