Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_F14
(580 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15 p... 89 8e-18
BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15 p... 89 8e-18
BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15 p... 89 8e-18
BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15 p... 89 8e-18
BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA 2... 89 8e-18
AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15 p... 89 8e-18
AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15 p... 89 8e-18
AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens ... 89 8e-18
AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L... 89 8e-18
AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15 p... 89 8e-18
L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10 pro... 87 6e-17
BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15 p... 86 7e-17
AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein. 32 1.7
BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein. 31 3.9
AB011137-1|BAA25491.2| 641|Homo sapiens KIAA0565 protein protein. 31 3.9
>BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA
2510008H07 gene protein.
Length = 219
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 156 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 207
>AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15
pseudogene 3 protein.
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens
clone TCBAP0781 mRNA sequence. ).
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L15
protein.
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10
protein.
Length = 205
Score = 86.6 bits (205), Expect = 6e-17
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI HKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPDHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 86.2 bits (204), Expect = 7e-17
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+ T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKSHHTIGGSRRAAW 192
>AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.
Length = 1315
Score = 31.9 bits (69), Expect = 1.7
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 52 VHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSR 153
++++R + +S G+ SRG G+G+R ++GGSR
Sbjct: 236 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 269
>BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein.
Length = 1427
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 42 RECG-TQTSRDARSDVRREKLSWSRQGTSLLSNQGRFPSRRLVTSQHLATASQAIN 206
R+C +QT+RD + D +R + W R + + ++ + S+ L+ A IN
Sbjct: 925 RDCDQSQTARDLKLDFQRTRQEWVRLHDKMKVDMSGLQAKNEILSEKLSNAESKIN 980
>AB011137-1|BAA25491.2| 641|Homo sapiens KIAA0565 protein protein.
Length = 641
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 42 RECG-TQTSRDARSDVRREKLSWSRQGTSLLSNQGRFPSRRLVTSQHLATASQAIN 206
R+C +QT+RD + D +R + W R + + ++ + S+ L+ A IN
Sbjct: 229 RDCDQSQTARDLKLDFQRTRQEWVRLHDKMKVDMSGLQAKNEILSEKLSNAESKIN 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,420,653
Number of Sequences: 237096
Number of extensions: 1634463
Number of successful extensions: 3946
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3939
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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