Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F13
         (535 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY185210-1|AAO22066.1| 1308|Homo sapiens EVC2 protein.                 31   3.4  
AY152403-1|AAN86578.1| 1166|Homo sapiens EVC2 protein variant pr...    31   3.4  
AY152402-1|AAN86577.1| 1228|Homo sapiens EVC2 protein protein.         31   3.4  
AC114738-1|AAY41034.1| 1072|Homo sapiens unknown protein.              31   3.4  
AB083067-1|BAC06590.1| 1228|Homo sapiens limbin protein.               31   3.4  
BC053877-1|AAH53877.1|  605|Homo sapiens solute carrier family 4...    29   7.8  
BC033858-1|AAH33858.2|  677|Homo sapiens SLC44A3 protein protein.      29   7.8  
AY358659-1|AAQ89022.1|  445|Homo sapiens SGRD558 protein.              29   7.8  
AL359554-1|CAC36091.1|  428|Homo sapiens dJ639P13.1 (novel prote...    29   7.8  

>AY185210-1|AAO22066.1| 1308|Homo sapiens EVC2 protein.
          Length = 1308

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 310 KEATIFKKQVLRCEEKFKDMYTRNIIKVAAAADVEIK 420
           K + +FKKQ L  E + ++ Y R ++ + A  D+E +
Sbjct: 427 KMSAVFKKQFLLLENEIQEEYDRKMVALTAECDLETR 463


>AY152403-1|AAN86578.1| 1166|Homo sapiens EVC2 protein variant
           protein.
          Length = 1166

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 310 KEATIFKKQVLRCEEKFKDMYTRNIIKVAAAADVEIK 420
           K + +FKKQ L  E + ++ Y R ++ + A  D+E +
Sbjct: 347 KMSAVFKKQFLLLENEIQEEYDRKMVALTAECDLETR 383


>AY152402-1|AAN86577.1| 1228|Homo sapiens EVC2 protein protein.
          Length = 1228

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 310 KEATIFKKQVLRCEEKFKDMYTRNIIKVAAAADVEIK 420
           K + +FKKQ L  E + ++ Y R ++ + A  D+E +
Sbjct: 347 KMSAVFKKQFLLLENEIQEEYDRKMVALTAECDLETR 383


>AC114738-1|AAY41034.1| 1072|Homo sapiens unknown protein.
          Length = 1072

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 310 KEATIFKKQVLRCEEKFKDMYTRNIIKVAAAADVEIK 420
           K + +FKKQ L  E + ++ Y R ++ + A  D+E +
Sbjct: 191 KMSAVFKKQFLLLENEIQEEYDRKMVALTAECDLETR 227


>AB083067-1|BAC06590.1| 1228|Homo sapiens limbin protein.
          Length = 1228

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 310 KEATIFKKQVLRCEEKFKDMYTRNIIKVAAAADVEIK 420
           K + +FKKQ L  E + ++ Y R ++ + A  D+E +
Sbjct: 347 KMSAVFKKQFLLLENEIQEEYDRKMVALTAECDLETR 383


>BC053877-1|AAH53877.1|  605|Homo sapiens solute carrier family 44,
           member 3 protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 486 ITIHVFFMYVLLGILF---HIWWFIFDLDIGCSCHFD 385
           + +H+F   V+LG+LF    +WW  +D     S   D
Sbjct: 191 LLVHIFISLVILGLLFVCGVLWWLYYDYTNDLSIELD 227


>BC033858-1|AAH33858.2|  677|Homo sapiens SLC44A3 protein protein.
          Length = 677

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 486 ITIHVFFMYVLLGILF---HIWWFIFDLDIGCSCHFD 385
           + +H+F   V+LG+LF    +WW  +D     S   D
Sbjct: 263 LLVHIFISLVILGLLFVCGVLWWLYYDYTNDLSIELD 299


>AY358659-1|AAQ89022.1|  445|Homo sapiens SGRD558 protein.
          Length = 445

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 486 ITIHVFFMYVLLGILF---HIWWFIFDLDIGCSCHFD 385
           + +H+F   V+LG+LF    +WW  +D     S   D
Sbjct: 31  LLVHIFISLVILGLLFVCGVLWWLYYDYTNDLSIELD 67


>AL359554-1|CAC36091.1|  428|Homo sapiens dJ639P13.1 (novel protein
           similar to rat transporter-like protein (CTL1)) protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 486 ITIHVFFMYVLLGILF---HIWWFIFDLDIGCSCHFD 385
           + +H+F   V+LG+LF    +WW  +D     S   D
Sbjct: 15  LLVHIFISLVILGLLFVCGVLWWLYYDYTNDLSIELD 51


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,746,696
Number of Sequences: 237096
Number of extensions: 1014345
Number of successful extensions: 2620
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2620
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)