Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_F13
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 32 0.23
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 32 0.23
AF497825-1|AAM18103.1| 670|Caenorhabditis elegans putative Na-H... 28 3.7
AF016447-15|AAR30208.1| 651|Caenorhabditis elegans Na/h exchang... 28 3.7
AF016447-14|AAG24015.2| 670|Caenorhabditis elegans Na/h exchang... 28 3.7
Z73898-3|CAC42390.2| 606|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z73898-2|CAC42388.1| 667|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z73898-1|CAC42389.1| 647|Caenorhabditis elegans Hypothetical pr... 28 4.8
U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF497835-1|AAM18113.1| 647|Caenorhabditis elegans putative Na-H... 28 4.8
AF497834-1|AAM18112.1| 667|Caenorhabditis elegans putative Na-H... 28 4.8
Z81486-8|CAB03990.2| 338|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z81133-4|CAI70414.2| 184|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z29121-1|CAA82387.3| 324|Caenorhabditis elegans Hypothetical pr... 27 6.4
AC006610-6|AAK85452.1| 395|Caenorhabditis elegans Hypothetical ... 27 6.4
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 27 8.5
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 27 8.5
AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical ... 27 8.5
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 27 8.5
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
T23F2.2b protein.
Length = 1538
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +1
Query: 301 LKLKEATIFKKQVLRCEEKFKDMYTRNIIKVAAAADVEIKDE 426
++ +E+ +++K++ EE+ K+MY K AA++EIK+E
Sbjct: 1459 IRRQESAMYEKKITEIEEERKEMYLVMFKKGQQAANMEIKEE 1500
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical protein
T23F2.2a protein.
Length = 1534
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +1
Query: 301 LKLKEATIFKKQVLRCEEKFKDMYTRNIIKVAAAADVEIKDE 426
++ +E+ +++K++ EE+ K+MY K AA++EIK+E
Sbjct: 1455 IRRQESAMYEKKITEIEEERKEMYLVMFKKGQQAANMEIKEE 1496
>AF497825-1|AAM18103.1| 670|Caenorhabditis elegans putative Na-H
exchanger isoform 3 protein.
Length = 670
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 477 HVFFMYVLLGILFHIWWFIFDLDIGCSCHFDNIPSVHIFKLLFTTENLF 331
H FF+Y+L I+F +F+ + + F N SV +F +L T N F
Sbjct: 98 HAFFLYLLPPIIFDAGYFMPNRAL-----FKNFDSVLVFSVLGTLWNTF 141
>AF016447-15|AAR30208.1| 651|Caenorhabditis elegans Na/h exchanger
protein 3, isoform b protein.
Length = 651
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 477 HVFFMYVLLGILFHIWWFIFDLDIGCSCHFDNIPSVHIFKLLFTTENLF 331
H FF+Y+L I+F +F+ + + F N SV +F +L T N F
Sbjct: 79 HAFFLYLLPPIIFDAGYFMPNRAL-----FKNFDSVLVFSVLGTLWNTF 122
>AF016447-14|AAG24015.2| 670|Caenorhabditis elegans Na/h exchanger
protein 3, isoform a protein.
Length = 670
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 477 HVFFMYVLLGILFHIWWFIFDLDIGCSCHFDNIPSVHIFKLLFTTENLF 331
H FF+Y+L I+F +F+ + + F N SV +F +L T N F
Sbjct: 98 HAFFLYLLPPIIFDAGYFMPNRAL-----FKNFDSVLVFSVLGTLWNTF 141
>Z73898-3|CAC42390.2| 606|Caenorhabditis elegans Hypothetical
protein ZK822.3c protein.
Length = 606
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 477 HVFFMYVLLGILFHIWWFIFDLDIGCSCHFDNIPSVHIFKLLFTTENLF 331
H FF+Y+L I+F +F+ + + F+N SV +F + T N F
Sbjct: 38 HTFFLYLLPPIIFDAGYFMPNRAL-----FENFDSVLVFSVFGTIWNTF 81
>Z73898-2|CAC42388.1| 667|Caenorhabditis elegans Hypothetical
protein ZK822.3b protein.
Length = 667
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 477 HVFFMYVLLGILFHIWWFIFDLDIGCSCHFDNIPSVHIFKLLFTTENLF 331
H FF+Y+L I+F +F+ + + F+N SV +F + T N F
Sbjct: 98 HTFFLYLLPPIIFDAGYFMPNRAL-----FENFDSVLVFSVFGTIWNTF 141
>Z73898-1|CAC42389.1| 647|Caenorhabditis elegans Hypothetical
protein ZK822.3a protein.
Length = 647
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 477 HVFFMYVLLGILFHIWWFIFDLDIGCSCHFDNIPSVHIFKLLFTTENLF 331
H FF+Y+L I+F +F+ + + F+N SV +F + T N F
Sbjct: 78 HTFFLYLLPPIIFDAGYFMPNRAL-----FENFDSVLVFSVFGTIWNTF 121
>U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical
protein C56C10.7a protein.
Length = 401
Score = 27.9 bits (59), Expect = 4.8
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Frame = +1
Query: 157 SFKYLSSSYKSGNEEVYSDMLRFTLDIHLAPVLGPLCTATYTI----CEPCILKLKEATI 324
+F + + + V S L+ L V+ P TI CE ++ E
Sbjct: 81 TFTFYVNVVNESEKTVSSVSLKCELQTSTQRVVLPCSVQDATIESSKCEGQVIS-HEVKE 139
Query: 325 FKKQVLRCEEKFK-----DMYTRNIIKVAAAADVEIKDEPPDVKENAQQDVHEE 471
+ +L C +K +MY R K + +++K + ++NA QDV+ E
Sbjct: 140 IGQHILICSVNYKTSNGENMYFRKFFKFPVSKPIDVKTKFYSAEDNANQDVYLE 193
>AF497835-1|AAM18113.1| 647|Caenorhabditis elegans putative Na-H
exchanger isoform 9b protein.
Length = 647
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 477 HVFFMYVLLGILFHIWWFIFDLDIGCSCHFDNIPSVHIFKLLFTTENLF 331
H FF+Y+L I+F +F+ + + F+N SV +F + T N F
Sbjct: 78 HTFFLYLLPPIIFDAGYFMPNRAL-----FENFDSVLVFSVFGTIWNTF 121
>AF497834-1|AAM18112.1| 667|Caenorhabditis elegans putative Na-H
exchanger isoform 9a protein.
Length = 667
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 477 HVFFMYVLLGILFHIWWFIFDLDIGCSCHFDNIPSVHIFKLLFTTENLF 331
H FF+Y+L I+F +F+ + + F+N SV +F + T N F
Sbjct: 98 HTFFLYLLPPIIFDAGYFMPNRAL-----FENFDSVLVFSVFGTIWNTF 141
>Z81486-8|CAB03990.2| 338|Caenorhabditis elegans Hypothetical
protein C53A5.10 protein.
Length = 338
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 441 FHIWWFIFDLDIGCSCHFDNIPSV-HIFKLLFTTENLFFKNCC 316
FH W+F + G S ++NIP + + F ++ TT L+ CC
Sbjct: 181 FHSWFFDPLIFEGRSAEYNNIPVLFNNFLIVITTCCLYMFFCC 223
>Z81133-4|CAI70414.2| 184|Caenorhabditis elegans Hypothetical
protein T28B8.6 protein.
Length = 184
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 79 FI*FNKMSYDEWKLEDDLCRCCHSEGSFKYLSSSYKSGNEEVYSDM 216
FI F + S D W E ++ R G +YL+ + + G+EE +++
Sbjct: 14 FITFAERSTDAWTKEFEVTRWDGYNGLQEYLNENLQQGSEEEKAEL 59
>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
protein T01E8.3 protein.
Length = 1299
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 287 ANRAY*NSKRQQFLKNRFSVVKRSLKICTLGILSKW 394
A+RA N + F+ +++ K+C + +L KW
Sbjct: 37 ASRAQLNRHNEMDFGKMFAAMEKGHKVCKIAVLKKW 72
>Z29121-1|CAA82387.3| 324|Caenorhabditis elegans Hypothetical
protein ZK757.1 protein.
Length = 324
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 205 YSDMLRFTLDIHLAPVLGPLCTATYTICEPCILKLKEATIF 327
Y D + F +H V+ L + IC P +L+ + TIF
Sbjct: 18 YRDRITFEFSVHGTCVVFNLFLCIFFICRPHLLRTFKPTIF 58
>AC006610-6|AAK85452.1| 395|Caenorhabditis elegans Hypothetical
protein C30F12.6 protein.
Length = 395
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = -2
Query: 456 LLGILFHIWW-FIFDL---DIGCSCHFDNIPSVHIFKLLF 349
+ +L+H +W F+ L DIG SC F + H +K++F
Sbjct: 160 IFSMLYHSYWLFLATLIKDDIGTSCSFRLERNSHAYKIVF 199
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 280 CMLLCTMGLVQALNEYLR*ILTYRCKLLRYRIYSYW 173
C+ LCT+ + L+ Y I TYR RY + +YW
Sbjct: 497 CLYLCTISI--RLSAYY--IFTYREDPYRYTVRTYW 528
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 280 CMLLCTMGLVQALNEYLR*ILTYRCKLLRYRIYSYW 173
C+ LCT+ + L+ Y I TYR RY + +YW
Sbjct: 477 CLYLCTISI--RLSAYY--IFTYREDPYRYTVRTYW 508
>AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical
protein Y47H9C.1 protein.
Length = 377
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 107 MNGNSKTIFAGAVIPKD-RLNIYPVAINPVT 196
+ G+S ++AG P D ++N+YP+ NP+T
Sbjct: 167 IKGSSGLLYAG--FPLDSKVNVYPIFSNPIT 195
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 280 CMLLCTMGLVQALNEYLR*ILTYRCKLLRYRIYSYW 173
C+ LCT+ + L+ Y I TYR RY + +YW
Sbjct: 477 CLYLCTISI--RLSAYY--IFTYREDPYRYTVRTYW 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,778,430
Number of Sequences: 27780
Number of extensions: 193752
Number of successful extensions: 631
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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