Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F12
         (505 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius...    62   5e-09
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ...    51   1e-05
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus...    47   3e-04
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka...    35   1.2  
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037...    33   2.8  
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/...    33   2.8  
UniRef50_A3ZQR8 Cluster: Chloride channel protein-like; n=1; Bla...    33   3.7  
UniRef50_UPI00015BE67E Cluster: UPI00015BE67E related cluster; n...    32   6.4  
UniRef50_Q0VQI5 Cluster: Membrane protein, putative; n=5; Bacter...    32   6.4  
UniRef50_A7RNK2 Cluster: Predicted protein; n=2; Nematostella ve...    32   8.5  

>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
           melpomene|Rep: Ribosomal protein L23a - Heliconius
           melpomene
          Length = 221

 Score = 62.5 bits (145), Expect = 5e-09
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +2

Query: 401 LVKPVTKALKAQRKVVKGEHGNRVRKIRTTVHFR 502
           +VKPV KALK Q+KVVKGEHG RVRKIRT+VHFR
Sbjct: 148 VVKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFR 181


>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
           protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to ribosomal protein L23Ae - Nasonia vitripennis
          Length = 247

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 22/31 (70%), Positives = 28/31 (90%)
 Frame = +2

Query: 407 KPVTKALKAQRKVVKGEHGNRVRKIRTTVHF 499
           +PV KALKAQ+K++KG  G+RVRKIRT+VHF
Sbjct: 107 QPVQKALKAQKKILKGVQGSRVRKIRTSVHF 137


>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
           cervinus|Rep: Ribosomal protein L23Ae - Dascillus
           cervinus
          Length = 212

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +2

Query: 401 LVKPVTKALKAQRKVVKGEHGNRVRKIRTTVHF 499
           + KPV KAL  Q+KV+KG  G R RKIR +VHF
Sbjct: 138 VAKPVQKALNVQKKVIKGPFGTRARKIRNSVHF 170


>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
           Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
           (Human)
          Length = 156

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +2

Query: 419 KALKAQRKVVKGEHGNRVRKIRTTVHFR 502
           KALKA++ V+KG H ++ +KIRT+  FR
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFR 47


>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
           n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
           ENSP00000339037 - Homo sapiens (Human)
          Length = 156

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +2

Query: 407 KPVTKALKAQRKVVKGEHGNRVRKIRTTVHFR 502
           K   KALKA++ V+KG H ++ +KI T+  FR
Sbjct: 16  KAKAKALKAKKAVLKGVHNHKKKKIHTSPTFR 47


>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
           Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 142

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 410 PVTKALKAQRKVVKGEHGNRVRKIRTTVHFRI 505
           P  KA  A++ VVKG +G +  K+RT+  FR+
Sbjct: 3   PSAKATAAKKAVVKGTNGKKALKVRTSATFRL 34


>UniRef50_A3ZQR8 Cluster: Chloride channel protein-like; n=1;
           Blastopirellula marina DSM 3645|Rep: Chloride channel
           protein-like - Blastopirellula marina DSM 3645
          Length = 655

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -2

Query: 483 RILRTLLPCSPLTTFLCALRALVTGFTSCFFCPLMPVFLGLGAIFNFVA 337
           R+ R  +P +PLT  L A+  ++TG+ S  F  L  +   L  +  FVA
Sbjct: 19  RLRRGTIPAAPLTIVLAAIAGVLTGYGSVLFAYLFEIIREL-TVLRFVA 66


>UniRef50_UPI00015BE67E Cluster: UPI00015BE67E related cluster; n=1;
           unknown|Rep: UPI00015BE67E UniRef100 entry - unknown
          Length = 134

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = -2

Query: 429 LRALVTGFTSCFFCPLMPVFLGLGAIFNFVA 337
           L+ +    T  FFC L  VFLGL  IF+FVA
Sbjct: 104 LKGIAIAVTGLFFC-LFTVFLGLDIIFDFVA 133


>UniRef50_Q0VQI5 Cluster: Membrane protein, putative; n=5;
           Bacteria|Rep: Membrane protein, putative - Alcanivorax
           borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
          Length = 355

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 465 LPCSPLTTFLCALRALVTGFTSCFFCPLMPVFLGL 361
           +P   LTT + A+ ALVTG  S F  P +PVF  +
Sbjct: 227 IPAMALTTVVLAVVALVTGTLSAFSEPWVPVFTSM 261


>UniRef50_A7RNK2 Cluster: Predicted protein; n=2; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1822

 Score = 31.9 bits (69), Expect = 8.5
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -2

Query: 495  CTVVRILRTLLPCSPLTTFLCALRALVTGFTSCFFCPLMPVFLGLGAIFNFVATGLG 325
            CT+  +   L   S +T  LC L  +  G  +    PL  V LGLG + + V  GLG
Sbjct: 1602 CTLSLVTLGLCTLSLVTLGLCTLSLVTLGLGTLTLVPLSLVTLGLGTL-SLVTLGLG 1657


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,577,810
Number of Sequences: 1657284
Number of extensions: 3704489
Number of successful extensions: 8440
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8437
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)