Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F11
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.   288   4e-78
U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.   288   4e-78
U08217-1|AAA19856.1|  148|Drosophila melanogaster protein ( Dros...   288   4e-78
AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA...   288   4e-78
AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA...   179   2e-45
AY069613-1|AAL39758.1|  343|Drosophila melanogaster LD37470p pro...    37   0.017
AJ430055-1|CAD22537.1|  343|Drosophila melanogaster twinfilin pr...    37   0.017
AE014297-1802|AAF55022.1|  343|Drosophila melanogaster CG3172-PA...    37   0.017
AY069123-1|AAL39268.1|  267|Drosophila melanogaster GH13245p pro...    31   0.85 
AE013599-3029|AAF57457.3|  267|Drosophila melanogaster CG13430-P...    31   0.85 
AE013599-3028|AAF57458.1|  267|Drosophila melanogaster CG13430-P...    31   0.85 
AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p pro...    31   1.1  
AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A ...    31   1.1  
AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA ...    31   1.1  
AE014297-3316|AAF56126.3| 2236|Drosophila melanogaster CG6768-PA...    29   6.0  
AB035512-1|BAB17608.1| 2220|Drosophila melanogaster DNA polymera...    29   6.0  

>U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score =  288 bits (706), Expect = 4e-78
 Identities = 136/148 (91%), Positives = 140/148 (94%)
 Frame = +3

Query: 75  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGG 254
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV  RNAEYD FLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 255 TGECRYGLFDFEYTHQCQGTS*ASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 434
            GECRYGLFDFEY HQCQGTS +SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 435 VQKYIQATDLSEASQEAVEEKLRATDRQ 518
           VQKYIQATDLSEAS+EAVEEKLRATDRQ
Sbjct: 121 VQKYIQATDLSEASREAVEEKLRATDRQ 148


>U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score =  288 bits (706), Expect = 4e-78
 Identities = 136/148 (91%), Positives = 140/148 (94%)
 Frame = +3

Query: 75  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGG 254
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV  RNAEYD FLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 255 TGECRYGLFDFEYTHQCQGTS*ASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 434
            GECRYGLFDFEY HQCQGTS +SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 435 VQKYIQATDLSEASQEAVEEKLRATDRQ 518
           VQKYIQATDLSEAS+EAVEEKLRATDRQ
Sbjct: 121 VQKYIQATDLSEASREAVEEKLRATDRQ 148


>U08217-1|AAA19856.1|  148|Drosophila melanogaster protein (
           Drosophila melanogastercofilin/actin depolymerizing
           factor homolog mRNA, completecds. ).
          Length = 148

 Score =  288 bits (706), Expect = 4e-78
 Identities = 136/148 (91%), Positives = 140/148 (94%)
 Frame = +3

Query: 75  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGG 254
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV  RNAEYD FLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 255 TGECRYGLFDFEYTHQCQGTS*ASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 434
            GECRYGLFDFEY HQCQGTS +SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 435 VQKYIQATDLSEASQEAVEEKLRATDRQ 518
           VQKYIQATDLSEAS+EAVEEKLRATDRQ
Sbjct: 121 VQKYIQATDLSEASREAVEEKLRATDRQ 148


>AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA
           protein.
          Length = 148

 Score =  288 bits (706), Expect = 4e-78
 Identities = 136/148 (91%), Positives = 140/148 (94%)
 Frame = +3

Query: 75  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGG 254
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV  RNAEYD FLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 255 TGECRYGLFDFEYTHQCQGTS*ASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 434
            GECRYGLFDFEY HQCQGTS +SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 435 VQKYIQATDLSEASQEAVEEKLRATDRQ 518
           VQKYIQATDLSEAS+EAVEEKLRATDRQ
Sbjct: 121 VQKYIQATDLSEASREAVEEKLRATDRQ 148


>AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA
           protein.
          Length = 148

 Score =  179 bits (436), Expect = 2e-45
 Identities = 80/148 (54%), Positives = 108/148 (72%)
 Frame = +3

Query: 75  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGG 254
           MASG+ +S  C+  +E+I+K K+HRY VF I+DE++I VE +G R A YD FL DLQ+ G
Sbjct: 1   MASGINLSRECQHVFEQIRKLKQHRYAVFVIQDEREIKVEVLGVREANYDDFLADLQRAG 60

Query: 255 TGECRYGLFDFEYTHQCQGTS*ASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 434
           + +CR+ ++D+EY HQCQGT     K+KL LM WCP  A++K KMLYSS+F  LK+   G
Sbjct: 61  SNQCRFAVYDYEYQHQCQGTLSTCLKEKLILMLWCPTLARIKDKMLYSSTFAVLKREFPG 120

Query: 435 VQKYIQATDLSEASQEAVEEKLRATDRQ 518
           VQK IQAT+  EA + AVEE+LR+ DR+
Sbjct: 121 VQKCIQATEPEEACRNAVEEQLRSLDRE 148


>AY069613-1|AAL39758.1|  343|Drosophila melanogaster LD37470p
           protein.
          Length = 343

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = +3

Query: 345 LMSWCPDTAKVKKKMLYSSSFDALKKSL--VGVQKYIQATDLSEASQE 482
           L+SW PDTA +++KM+Y+S+   LK       + + + AT L E + E
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLE 132


>AJ430055-1|CAD22537.1|  343|Drosophila melanogaster twinfilin
           protein.
          Length = 343

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = +3

Query: 345 LMSWCPDTAKVKKKMLYSSSFDALKKSL--VGVQKYIQATDLSEASQE 482
           L+SW PDTA +++KM+Y+S+   LK       + + + AT L E + E
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLE 132


>AE014297-1802|AAF55022.1|  343|Drosophila melanogaster CG3172-PA
           protein.
          Length = 343

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = +3

Query: 345 LMSWCPDTAKVKKKMLYSSSFDALKKSL--VGVQKYIQATDLSEASQE 482
           L+SW PDTA +++KM+Y+S+   LK       + + + AT L E + E
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLE 132


>AY069123-1|AAL39268.1|  267|Drosophila melanogaster GH13245p
           protein.
          Length = 267

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +3

Query: 93  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGTGECR 269
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C+
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSCQ 213


>AE013599-3029|AAF57457.3|  267|Drosophila melanogaster CG13430-PB,
           isoform B protein.
          Length = 267

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +3

Query: 93  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGTGECR 269
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C+
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSCQ 213


>AE013599-3028|AAF57458.1|  267|Drosophila melanogaster CG13430-PA,
           isoform A protein.
          Length = 267

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +3

Query: 93  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGTGECR 269
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C+
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSCQ 213


>AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p
           protein.
          Length = 712

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 24/79 (30%), Positives = 35/79 (44%)
 Frame = +3

Query: 207 RNAEYDSFLEDLQKGGTGECRYGLFDFEYTHQCQGTS*ASKKQKLFLMSWCPDTAKVKKK 386
           R  + +S LE +Q G     R+G  D      C  T+   +K K F M      +KVKK 
Sbjct: 634 RKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKNFGMLRHKARSKVKKS 693

Query: 387 MLYSSSFDALKKSLVGVQK 443
             +     AL+K L+  +K
Sbjct: 694 --FKDKQQALRKHLLHQKK 710


>AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A
           protein.
          Length = 712

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 24/79 (30%), Positives = 35/79 (44%)
 Frame = +3

Query: 207 RNAEYDSFLEDLQKGGTGECRYGLFDFEYTHQCQGTS*ASKKQKLFLMSWCPDTAKVKKK 386
           R  + +S LE +Q G     R+G  D      C  T+   +K K F M      +KVKK 
Sbjct: 634 RKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKNFGMLRHKARSKVKKS 693

Query: 387 MLYSSSFDALKKSLVGVQK 443
             +     AL+K L+  +K
Sbjct: 694 --FKDKQQALRKHLLHQKK 710


>AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA
           protein.
          Length = 712

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 24/79 (30%), Positives = 35/79 (44%)
 Frame = +3

Query: 207 RNAEYDSFLEDLQKGGTGECRYGLFDFEYTHQCQGTS*ASKKQKLFLMSWCPDTAKVKKK 386
           R  + +S LE +Q G     R+G  D      C  T+   +K K F M      +KVKK 
Sbjct: 634 RKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKNFGMLRHKARSKVKKS 693

Query: 387 MLYSSSFDALKKSLVGVQK 443
             +     AL+K L+  +K
Sbjct: 694 --FKDKQQALRKHLLHQKK 710


>AE014297-3316|AAF56126.3| 2236|Drosophila melanogaster CG6768-PA
            protein.
          Length = 2236

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +3

Query: 117  YEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGTGECRYGLFDFEYT 296
            Y E++KDK++    + IRDE  I  E  G   A      +  ++G   + RY +F+F+ T
Sbjct: 908  YHELRKDKENNLPKYDIRDENSIFFEVDGPYLAMVLPAAK--EEGKKLKKRYAVFNFDGT 965


>AB035512-1|BAB17608.1| 2220|Drosophila melanogaster DNA polymerase
            epsilon protein.
          Length = 2220

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +3

Query: 117  YEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGTGECRYGLFDFEYT 296
            Y E++KDK++    + IRDE  I  E  G   A      +  ++G   + RY +F+F+ T
Sbjct: 908  YHELRKDKENNLPKYDIRDENSIFFEVDGPYLAMVLPAAK--EEGKKLKKRYAVFNFDGT 965


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,367,471
Number of Sequences: 53049
Number of extensions: 479585
Number of successful extensions: 1580
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1580
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)