Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_F10
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AC024812-8|AAF59557.4| 912|Caenorhabditis elegans Hypothetical ... 32 0.35
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 31 0.80
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 30 1.1
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 30 1.1
U53148-7|AAB37074.4| 529|Caenorhabditis elegans Cytochrome p450... 29 2.4
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 29 2.4
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 29 2.4
U41533-11|AAO38614.1| 387|Caenorhabditis elegans Hypothetical p... 29 2.4
U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical p... 29 2.4
U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 29 2.4
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 28 5.7
Z70781-4|CAA94834.1| 385|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 27 7.5
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 27 7.5
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 27 7.5
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 27 7.5
Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z82058-1|CAB04862.2| 352|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 86.6 bits (205), Expect = 1e-17
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Frame = +1
Query: 121 EQLTQLKLFVELCKTQPQILHHPKLVFFKEYLGSLGVTIPTATFGA-KSFTPSGDSNTSA 297
+ + LK FV +C+ P +LH P+ FFK+YL SLG T+P + P +
Sbjct: 2 DHVALLKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKPADKPEGKCPMSEEPKKE 61
Query: 298 NNAXXXXXXXXXXXXXXXXXXXLDMDGVIEADSLDSNQLMGDSSKEVTDEERDQSDEKRS 477
A +D +GVIE + + MGDS+KE T++E +++ E+R
Sbjct: 62 TPAAEATPEPEIPKPEEIPFPKIDNEGVIEPEEAVALP-MGDSAKEATEDEIEKASEERG 120
Query: 478 EAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKR 582
+A AFS ++ A+ +T AI NP SA+ AKR
Sbjct: 121 KAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKR 155
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 86.6 bits (205), Expect = 1e-17
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Frame = +1
Query: 121 EQLTQLKLFVELCKTQPQILHHPKLVFFKEYLGSLGVTIPTATFGA-KSFTPSGDSNTSA 297
+ + LK FV +C+ P +LH P+ FFK+YL SLG T+P + P +
Sbjct: 2 DHVALLKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKPADKPEGKCPMSEEPKKE 61
Query: 298 NNAXXXXXXXXXXXXXXXXXXXLDMDGVIEADSLDSNQLMGDSSKEVTDEERDQSDEKRS 477
A +D +GVIE + + MGDS+KE T++E +++ E+R
Sbjct: 62 TPAAEATPEPEIPKPEEIPFPKIDNEGVIEPEEAVALP-MGDSAKEATEDEIEKASEERG 120
Query: 478 EAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKR 582
+A AFS ++ A+ +T AI NP SA+ AKR
Sbjct: 121 KAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKR 155
>AC024812-8|AAF59557.4| 912|Caenorhabditis elegans Hypothetical
protein Y54E10BR.1 protein.
Length = 912
Score = 31.9 bits (69), Expect = 0.35
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 37 FLIFCHLFVS*VYQC*IPIFIMSCPFNEEQLTQ-LKLFVELCKTQPQILHH--PKLVFFK 207
F +C L ++ +PI+++S N +LTQ ++ V+ QP L+ VF K
Sbjct: 463 FTAYCSLSMTQTIYIILPIYLISILENHSKLTQRIREHVKALSAQPDWLNKVLSVEVFVK 522
Query: 208 EYLGSLGVTIPTATF 252
+LG +G +I F
Sbjct: 523 PFLGFVGFSITICIF 537
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +1
Query: 442 DEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQ 588
++E++++ + EA + F + Y+ A LY+ AI I+P +A+ + R Q
Sbjct: 23 EDEKEKAGMIKDEANQFFKDQVYDVAADLYSVAIEIHP-TAVLYGNRAQ 70
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 388 ADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEH--QYNEAIKLYTEAILINPQS 561
+D+LDS Q GD +KE +Q+ +K SE + +H + +++ K Y E
Sbjct: 199 SDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASD 258
Query: 562 ALFFAKR 582
A+ AK+
Sbjct: 259 AVESAKK 265
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 388 ADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEH--QYNEAIKLYTEAILINPQS 561
+D+LDS Q GD +KE +Q+ +K SE + +H + +++ K Y E
Sbjct: 199 SDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASD 258
Query: 562 ALFFAKR 582
A+ AK+
Sbjct: 259 AVESAKK 265
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 388 ADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEH--QYNEAIKLYTEAILINPQS 561
+D+LDS Q GD +KE +Q+ +K SE + +H + +++ K Y E
Sbjct: 199 SDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASD 258
Query: 562 ALFFAKR 582
A+ AK+
Sbjct: 259 AVESAKK 265
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 388 ADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEH--QYNEAIKLYTEAILINPQS 561
+D+LDS Q GD +KE +Q+ +K SE + +H + +++ K Y E
Sbjct: 199 SDALDSAQKHGDDAKESAQGYFEQAKDKSSEIWDSAKKHGEEASDSAKDYFEQAKDKASD 258
Query: 562 ALFFAKR 582
A+ AK+
Sbjct: 259 AVESAKK 265
>U53148-7|AAB37074.4| 529|Caenorhabditis elegans Cytochrome p450
family protein 32A1 protein.
Length = 529
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 LPVLNPYFHNELSFQRRTINAI-KIIRGIMQNSTSDFTSSKIGILQRISWIAWGHNTHCY 248
L V YF F+R T++ I + GI N+ + + ++RIS I W H +
Sbjct: 183 LHVDGDYFDAFPYFKRCTLDIICETAMGIQVNAQLGHNNEYVHAVKRISEIVWNHMKFPW 242
Query: 249 IW 254
+W
Sbjct: 243 LW 244
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +1
Query: 385 EADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQ-YNEAI 522
E++ DSN+L S K+ D+E ++DE+++E R+++E++ NE++
Sbjct: 688 ESEGTDSNKLSDSSKKKEADKE--EADEEKAE--RSWTEYEKQNESL 730
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +1
Query: 385 EADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQ-YNEAI 522
E++ DSN+L S K+ D+E ++DE+++E R+++E++ NE++
Sbjct: 691 ESEGTDSNKLSDSSKKKEADKE--EADEEKAE--RSWTEYEKQNESL 733
>U41533-11|AAO38614.1| 387|Caenorhabditis elegans Hypothetical
protein R05F9.1c protein.
Length = 387
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 239 PLLHLVLKASHLPETATLLLTMLRVNHRNHPMKNQPLNLMWN 364
PL L+ + + LP+ +L ++ NHP+ + P+N N
Sbjct: 341 PLNQLMQQQAQLPQNNAMLGVNVQQQQHNHPLHSPPVNFQRN 382
>U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical
protein R05F9.1a protein.
Length = 491
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 239 PLLHLVLKASHLPETATLLLTMLRVNHRNHPMKNQPLNLMWN 364
PL L+ + + LP+ +L ++ NHP+ + P+N N
Sbjct: 445 PLNQLMQQQAQLPQNNAMLGVNVQQQQHNHPLHSPPVNFQRN 486
>U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical
protein R05F9.1b protein.
Length = 588
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 239 PLLHLVLKASHLPETATLLLTMLRVNHRNHPMKNQPLNLMWN 364
PL L+ + + LP+ +L ++ NHP+ + P+N N
Sbjct: 542 PLNQLMQQQAQLPQNNAMLGVNVQQQQHNHPLHSPPVNFQRN 583
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +1
Query: 385 EADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQ-YNEAI 522
E++ DSN+L S K+ D+E ++DE+++E R+++E++ NE++
Sbjct: 688 ESEGTDSNKLSDSSKKKEADKE--EADEEKAE--RSWTEYEKQNESL 730
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 397 LDSNQLMGDSSKEVTDEE-RDQSDEKRSEAMRAFSEHQYNEAIK 525
++ +L+ ++ K + + E R + D+K+ EAMR +++Y+ A K
Sbjct: 513 VELEELLKETEKRIKESEHRRREDQKKFEAMRLHYKNKYDAAKK 556
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 397 LDSNQLMGDSSKEVTDEE-RDQSDEKRSEAMRAFSEHQYNEAIK 525
++ +L+ ++ K + + E R + D+K+ EAMR +++Y+ A K
Sbjct: 513 VELEELLKETEKRIKESEHRRREDQKKFEAMRLHYKNKYDAAKK 556
>Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical
protein F59B2.12 protein.
Length = 918
Score = 28.7 bits (61), Expect = 3.2
Identities = 25/98 (25%), Positives = 33/98 (33%), Gaps = 4/98 (4%)
Frame = +1
Query: 244 ATFGAKSFTPSGDSNTSANNAXXXXXXXXXXXXXXXXXXXLDMDGVIEADSLDSNQLMGD 423
A+ AKS + S A D+D I + S + D
Sbjct: 606 ASANAKSSLDTSMSAVDAKGNKVDKTSSQAADSHDAISASSDVDAKIVKHADRSESISND 665
Query: 424 SSKEVTDEERDQSD----EKRSEAMRAFSEHQYNEAIK 525
SS + E D S EKR A +FS+ N A K
Sbjct: 666 SSNQTASEHNDSSKQSEHEKRQNADGSFSDVSSNSAKK 703
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 385 EADSLDSNQLMGDS-SKEVTDEERDQSDEK 471
+ D DS+++ D+ S+EV DEE D SDE+
Sbjct: 672 DEDDDDSSEIDWDAESEEVEDEESDDSDEE 701
>Z70781-4|CAA94834.1| 385|Caenorhabditis elegans Hypothetical
protein F57A8.6 protein.
Length = 385
Score = 25.0 bits (52), Expect(2) = 6.6
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -1
Query: 240 GYCDPKRSKIF-FEEYQFWMM*NLRLS 163
GYCDPK ++F E F N LS
Sbjct: 319 GYCDPKTGRVFIMSELNFHGQRNKELS 345
Score = 21.0 bits (42), Expect(2) = 6.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 279 SGRCEAFSTKCSSGYCDP 226
SG+C+ + C G+C P
Sbjct: 270 SGKCKTPNGICKYGHCCP 287
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 109 PFNEEQLTQLKLFVELCKTQPQILHHPKLV--FFKEYLGS 222
PFNEEQ LK + K P + H K + FK+ GS
Sbjct: 320 PFNEEQEKLLKSIINQSKIIPMMPRHTKHLCHVFKQEFGS 359
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 385 EADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILIN 552
E + +S + D E ++EE D+ DE+ E + E + N +A+++N
Sbjct: 600 EEEENESEEEEEDDEDEESEEESDEEDEEEEEEDDSEPEEKPNPKPSTKKQALILN 655
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 385 EADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILIN 552
E + +S + D E ++EE D+ DE+ E + E + N +A+++N
Sbjct: 610 EEEENESEEEEEDDEDEESEEESDEEDEEEEEEDDSEPEEKPNPKPSTKKQALILN 665
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 109 PFNEEQLTQLKLFVELCKTQPQILHHPKLV--FFKEYLGS 222
PFNEEQ LK + K P + H K + FK+ GS
Sbjct: 320 PFNEEQEKLLKSIINQSKIIPMMPRHTKHLCHVFKQEFGS 359
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 367 DMDGVIEADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIK 525
D D E + D ++ + E DEE + DE+ EA + + NE +K
Sbjct: 35 DEDEEEENEDEDEDEDDDNDDDEDDDEEEEDEDEEEDEAEDEAEDDEENEEVK 87
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 478 EAMRAFSEHQYNEAIKLYTEAILINPQSALFFA 576
EA A+S+ +Y EA +LY +A+ +P++ + A
Sbjct: 11 EAGSAYSDGRYQEARELYEKALRDHPKNGILHA 43
>Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical
protein K05D4.2 protein.
Length = 338
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 224 LGSQYPLLHLVLKA-SHLPETATLLLTMLRVNHRNHPMKNQPLNLM 358
LG Y + ++K SH+ E + ++ ++LRV + P+ L+LM
Sbjct: 53 LGVVYSCIDFIVKPNSHITERSFVIFSVLRVTKLSKPVAEVGLSLM 98
>Z82058-1|CAB04862.2| 352|Caenorhabditis elegans Hypothetical
protein T27C5.1 protein.
Length = 352
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 143 YSWNYAKLNLRFYIIQNWYS---SKNILDRLGSQYPLLHLVLKASHLPETATLLLTMLRV 313
Y+ NY+ NL + ++ +W S S ++ + + +L + P + T L +
Sbjct: 9 YATNYSNCNLTYNLLASWQSISYSSRVIQLVALPFQILAFYVILYKTPIAMKISKTPLLI 68
Query: 314 NH 319
NH
Sbjct: 69 NH 70
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 118 EEQLTQLK-LFVELCKTQPQILHHPKLVFFKEYLGSLGV 231
+++ T++ +FV QP ILHHP+L F + G G+
Sbjct: 344 KDKATEISNVFVSDWLPQPAILHHPRLRTFITHAGYNGL 382
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,982,469
Number of Sequences: 27780
Number of extensions: 230666
Number of successful extensions: 886
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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