Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_F08
(485 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 275 9e-75
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 266 6e-72
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 260 4e-70
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 260 4e-70
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 259 7e-70
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 258 2e-69
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 181 3e-46
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 181 3e-46
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 132 2e-31
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 132 2e-31
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 130 4e-31
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 130 5e-31
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 130 7e-31
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 130 7e-31
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 125 1e-29
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 125 1e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 123 8e-29
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 123 8e-29
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 123 8e-29
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 123 8e-29
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 122 1e-28
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 121 3e-28
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 117 5e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 101 3e-22
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 101 3e-22
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 100 6e-22
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 30 1.0
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 29 1.8
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 29 1.8
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 29 1.8
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 29 1.8
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 4.1
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 275 bits (675), Expect = 9e-75
Identities = 122/131 (93%), Positives = 129/131 (98%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 430 RKESESCDCYQ 462
RKE+ESCDC Q
Sbjct: 121 RKEAESCDCLQ 131
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 266 bits (652), Expect = 6e-72
Identities = 116/131 (88%), Positives = 125/131 (95%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 430 RKESESCDCYQ 462
RKE+E CDC Q
Sbjct: 121 RKEAEGCDCLQ 131
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 260 bits (637), Expect = 4e-70
Identities = 115/131 (87%), Positives = 124/131 (94%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 430 RKESESCDCYQ 462
RKE+ES DC Q
Sbjct: 121 RKEAESTDCLQ 131
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 260 bits (637), Expect = 4e-70
Identities = 115/131 (87%), Positives = 124/131 (94%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 430 RKESESCDCYQ 462
RKE+ES DC Q
Sbjct: 121 RKEAESTDCLQ 131
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 259 bits (635), Expect = 7e-70
Identities = 113/131 (86%), Positives = 124/131 (94%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVI
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 430 RKESESCDCYQ 462
RKE+E CDC Q
Sbjct: 121 RKEAEGCDCLQ 131
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 258 bits (632), Expect = 2e-69
Identities = 112/131 (85%), Positives = 124/131 (94%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVI
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 430 RKESESCDCYQ 462
RKE+E CDC Q
Sbjct: 121 RKEAEGCDCLQ 131
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 181 bits (440), Expect = 3e-46
Identities = 78/128 (60%), Positives = 102/128 (79%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL VI
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 430 RKESESCD 453
R+E+E+ D
Sbjct: 121 RREAEAAD 128
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 181 bits (440), Expect = 3e-46
Identities = 78/128 (60%), Positives = 102/128 (79%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL VI
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 430 RKESESCD 453
R+E+E+ D
Sbjct: 121 RREAEAAD 128
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 132 bits (318), Expect = 2e-31
Identities = 56/131 (42%), Positives = 82/131 (62%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 430 RKESESCDCYQ 462
R+ +++C Q
Sbjct: 121 RRLADNCSGLQ 131
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 132 bits (318), Expect = 2e-31
Identities = 56/131 (42%), Positives = 82/131 (62%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 430 RKESESCDCYQ 462
R+ +++C Q
Sbjct: 121 RRLADNCSGLQ 131
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 130 bits (315), Expect = 4e-31
Identities = 59/131 (45%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 249
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD I
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 430 RKESESCDCYQ 462
RK++E+C+ Q
Sbjct: 126 RKQTENCEGLQ 136
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 130 bits (314), Expect = 5e-31
Identities = 61/133 (45%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 243
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 244 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 423
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 424 VIRKESESCDCYQ 462
+R+ +E C Q
Sbjct: 121 RVRRLTERCQSLQ 133
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 130 bits (313), Expect = 7e-31
Identities = 56/131 (42%), Positives = 83/131 (63%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 430 RKESESCDCYQ 462
R+ +++C Q
Sbjct: 121 RRLADNCSGLQ 131
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 130 bits (313), Expect = 7e-31
Identities = 56/131 (42%), Positives = 83/131 (63%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 430 RKESESCDCYQ 462
R+ +++C Q
Sbjct: 121 RRLADNCSGLQ 131
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 125 bits (302), Expect = 1e-29
Identities = 53/131 (40%), Positives = 81/131 (61%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 430 RKESESCDCYQ 462
R+ +++C Q
Sbjct: 121 RRLADNCSGLQ 131
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 125 bits (302), Expect = 1e-29
Identities = 53/131 (40%), Positives = 81/131 (61%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD I
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 430 RKESESCDCYQ 462
R+ +++C Q
Sbjct: 121 RRLADNCSGLQ 131
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 123 bits (296), Expect = 8e-29
Identities = 58/138 (42%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Frame = +1
Query: 61 KYK-MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNE 228
+YK RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E
Sbjct: 3 QYKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAE 61
Query: 229 ASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 408
+GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++
Sbjct: 62 TAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMI 121
Query: 409 DSVLDVIRKESESCDCYQ 462
D V+D +++ +E+C+ Q
Sbjct: 122 DVVMDRVKRLAENCNGLQ 139
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 123 bits (296), Expect = 8e-29
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 243
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 244 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 423
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 424 VIRKESESC 450
IR+ +++C
Sbjct: 121 RIRRLADNC 129
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 123 bits (296), Expect = 8e-29
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 243
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 244 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 423
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 424 VIRKESESC 450
IR+ +++C
Sbjct: 121 RIRRLADNC 129
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 123 bits (296), Expect = 8e-29
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 243
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 244 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 423
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 424 VIRKESESC 450
IR+ +++C
Sbjct: 121 RIRRLADNC 129
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 122 bits (295), Expect = 1e-28
Identities = 53/130 (40%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = +1
Query: 67 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 240
+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 241 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 420
K+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 421 DVIRKESESC 450
D +R+ E+C
Sbjct: 125 DRVRRLVENC 134
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 121 bits (291), Expect = 3e-28
Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 246
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 247 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 426
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 427 IRKESESC 450
IR+ +++C
Sbjct: 121 IRRLADNC 128
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 117 bits (281), Expect = 5e-27
Identities = 52/131 (39%), Positives = 82/131 (62%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 250 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 429
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD I
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 430 RKESESCDCYQ 462
R+ + +C+ Q
Sbjct: 120 RRLANNCEGLQ 130
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 101 bits (242), Expect = 3e-22
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Frame = +1
Query: 79 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 258
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 259 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVI 429
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+I
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 430 RKESES 447
+E+E+
Sbjct: 125 IREAEN 130
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 101 bits (242), Expect = 3e-22
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Frame = +1
Query: 79 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 258
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 259 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVI 429
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+I
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 430 RKESES 447
+E+E+
Sbjct: 125 IREAEN 130
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 100 bits (239), Expect = 6e-22
Identities = 45/108 (41%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Frame = +1
Query: 148 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 318
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 319 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESESCDCYQ 462
+F P+ + G+ A N +A+G YT G E++D V+D +++ +E+C+ Q
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQ 111
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -1
Query: 431 RITSRTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRNICPKGPERTESMVPGSRS 267
RI+ + S SS+PS CP LL PAP P + G PK + PG+
Sbjct: 301 RISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVPEPPGNMK 360
Query: 266 T 264
T
Sbjct: 361 T 361
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.8
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 402 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 238
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 237 SGGLIVINIDALKLQV-RIAVVCTGGV 160
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 29.1 bits (62), Expect = 1.8
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 402 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 238
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 237 SGGLIVINIDALKLQV-RIAVVCTGGV 160
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 29.1 bits (62), Expect = 1.8
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 402 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 238
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 237 SGGLIVINIDALKLQV-RIAVVCTGGV 160
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.8
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 402 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 238
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 237 SGGLIVINIDALKLQV-RIAVVCTGGV 160
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -3
Query: 252 GHVLASGGLIVINIDALKL---QVRIAVVCTGGVDAVLV 145
GH L GL ++N A L Q+ +A +C GG +A V
Sbjct: 347 GHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAV 385
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 136 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 273
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,962,195
Number of Sequences: 27780
Number of extensions: 224915
Number of successful extensions: 778
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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