Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F08
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.99 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   3.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.0  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   9.2  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 197 CKSESPWYAPVGSMPC 150
           CK +  WY P G   C
Sbjct: 234 CKGDGKWYLPSGGCHC 249


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 472 SWNPGNNHMIRILFGLRQELSRL 404
           +W PGN+  +R++    +E +R+
Sbjct: 341 NWVPGNHDQLRLVSRFGEEKARM 363


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +1

Query: 406 VDSVLDVIRKESESCD 453
           +DS++++IR   ++CD
Sbjct: 106 IDSIINIIRVRVDACD 121


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 472 SWNPGNNHMIRILFGLRQELSRL 404
           +W PGN+  +R++    +E +R+
Sbjct: 341 NWVPGNHDQLRLVSRFGEEKARM 363


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 184 DSDLQLERINVYYNEASGGKYV 249
           D+ L+   I  Y N+  GG++V
Sbjct: 72  DARLKFSNIAPYLNQIYGGQFV 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,491
Number of Sequences: 438
Number of extensions: 2441
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)