Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F06
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.47 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           24   0.62 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   2.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   4.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   5.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 342 APTSSPELGAHSRGSPQGAPRRRETSHRITREAA 443
           AP   P    H R +    PR     H +TR AA
Sbjct: 313 APRERPRATDHQRRNEPKRPRPNIDRHEVTRPAA 346


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 203 NRQLKEHGELEQSTEGSAPTPWCSRSPSYPT 295
           NR      +  QS +   PTP CS + S PT
Sbjct: 174 NRYYNNSPDQYQSYQILLPTPTCSEASSSPT 204



 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 137 SIRGVTPDHRSVSEGNAGE 81
           S++ +  DH + + GN+GE
Sbjct: 150 SLKQMIEDHENDTTGNSGE 168


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 339 SAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP 455
           S  T+SP     S+ SP  APR   T   I   + +  P
Sbjct: 195 SRTTTSPTKVKASKASPAAAPRSVATPTGIPTPSTSASP 233


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 167 GFPEDDQ*TI*RNRQLKEHGELEQSTEGSAPTP 265
           GF E+ + +  R + + EH +   S + + P+P
Sbjct: 199 GFRENGKSSAKRKQLVSEHPDSPNSKKSATPSP 231


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 20  NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGPA 121
           +F + + RLR+R G++   VV     R  SDG A
Sbjct: 6   DFDTRTVRLRNRVGKRKGNVVADILSRYPSDGEA 39


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 9   ADLATSLRTRTDSDTAMAAKCFVLFACV 92
           +DL   LR   +  +++ + C V+F C+
Sbjct: 82  SDLQQKLRYFEEVFSSLLSCCSVIFGCI 109


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 9   ADLATSLRTRTDSDTAMAAKCFVLFACV 92
           +DL   LR   +  +++ + C V+F C+
Sbjct: 82  SDLQQKLRYFEEVFSSLLSCCSVIFGCI 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.123    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,103
Number of Sequences: 336
Number of extensions: 1837
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)