Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_F06
(473 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.039
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 29 0.27
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.27
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 28 0.83
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 27 1.1
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.5
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 1.9
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 2.5
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 3.4
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 3.4
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 25 4.5
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 5.9
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 25 5.9
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 25 5.9
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 5.9
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 5.9
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 5.9
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 7.8
SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family ... 25 7.8
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 7.8
SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 25 7.8
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 7.8
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 25 7.8
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 7.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 32.3 bits (70), Expect = 0.039
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +1
Query: 262 SMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL 441
+++ + + N+L+ + + K E Q + Q+L+R + + +K H E Q L +L
Sbjct: 483 ALIDKKDQELNNLREQIKEQK-KVSESTQSSLQSLQRDILNEKKKHEVYESQLNELKGEL 541
Query: 442 QTAIQNT 462
QT I N+
Sbjct: 542 QTEISNS 548
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.5 bits (63), Expect = 0.27
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +1
Query: 319 ANGKAKEV--LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQN 459
A K KE+ LQQ R NLER +D+ +E+ A EK + +QN
Sbjct: 237 ARNKQKEINILQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN 287
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.27
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 343 LQQARQNLERTVEDLRKAHPDVEK 414
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.9 bits (59), Expect = 0.83
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 93 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEVLRLHG 269
+L GA V ++ I K DF K I FN + L A+ E+ + G
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQAEG 105
Query: 270 AAGLRVI 290
+ + +
Sbjct: 106 STNVNEV 112
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.5 bits (58), Expect = 1.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 322 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQ 417
NG A+E+ A + L VE+LRKA D+E++
Sbjct: 66 NGNAEEIF--ANKRLRVCVEELRKARLDLEEE 95
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.5
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 63 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 170
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 1.9
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 265 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 444
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
Score = 25.8 bits (54), Expect = 3.4
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 256 SDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEKQ 417
S++ V + E + L L+ K+ L++ +Q L EDLRK D EK+
Sbjct: 1009 SETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEKE 1065
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.2 bits (55), Expect = 2.5
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 291 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 461
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 462 TKGE 473
T+ E
Sbjct: 723 TRQE 726
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 322 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 450
N +K L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 3.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 310 LTDANGKAKEVLQQARQN 363
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 25.4 bits (53), Expect = 4.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 362 FWRACWSTSLALPFASVNAPCRLLDN 285
F C S +L+LP +N P R+ D+
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCDS 224
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 5.9
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -2
Query: 139 IVLGASR-RTIAP*ARATQANNTKHLA 62
+ LG SR TI+P RA Q++ ++HLA
Sbjct: 214 LALGLSRVYTISPAFRAEQSHTSRHLA 240
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 25.0 bits (52), Expect = 5.9
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +1
Query: 346 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTL 465
++AR+NL+ V + + P+++ + + +L+ I+++L
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSL 124
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 25.0 bits (52), Expect = 5.9
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 367 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKE 471
ERT E + A D+EKQ + H++ Q+++ + L+E
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEE 38
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 5.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 310 LTDANGKAKEVLQQARQNLERT 375
L D+ KAK L+QAR LERT
Sbjct: 401 LLDSIKKAKTELEQARIELERT 422
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 5.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 365 WSAQSRISARRTPTSRNKPPHYTRSCKPP 451
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.0 bits (52), Expect = 5.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 132 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKE 251
NT+ + + K +Q FQ S +FN + N ++K+L++
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQ 522
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -2
Query: 220 FFELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 104
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 24.6 bits (51), Expect = 7.8
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Frame = +3
Query: 123 DAPNTILQDLEKHAQD------FQKTISE----QFNAIVNSKNTESLNKAL-KEVLRLHG 269
+ P+T++QDL +H +D FQK + FN+ V+S+ + L + ++ + L G
Sbjct: 192 ETPSTLIQDLAEHNEDVLVANCFQKQGDKLTPYDFNSWVDSQTAQELASHMDRDEILLEG 251
Query: 270 AAGL 281
A L
Sbjct: 252 YAEL 255
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 7.8
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -1
Query: 455 WMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSL 333
W+ + S + F T+G R S + FWR + +
Sbjct: 105 WIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWRISYDAGI 145
>SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 629
Score = 24.6 bits (51), Expect = 7.8
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +3
Query: 78 LFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEVL 257
LFA + + ++ +D P+T + + + S++FN ++ S N E +
Sbjct: 207 LFAHMRVPRTNLIDKDTPSTAYHRTGYNGRKYNLVFSDEFNK--EGRSFYSGNDQFWEAV 264
Query: 258 RLHGAA 275
+H AA
Sbjct: 265 NIHYAA 270
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 7.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 20 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 118
N S R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 217 FELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTI 110
+++++ L L + WKSW S S ++L +S R +
Sbjct: 139 YQISVVLLLCLTMGWKSWT--SASGAVILSSSTRML 172
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 7.8
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +3
Query: 345 PTSSP--ELGAHSRGSPQG 395
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.123 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,737,437
Number of Sequences: 5004
Number of extensions: 30911
Number of successful extensions: 137
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 182448900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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