Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F06
         (473 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   0.95 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   5.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   8.9  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 404 SGCALRRSSTVRSKFWRACWSTSLALPFASVNAPCRLLD 288
           +GC L   +  ++K+ RAC + SL L   +     R+LD
Sbjct: 366 AGCDLTIDNLRKAKYLRACITESLRL-IPTTTCIARILD 403


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 209 QLKEHGELEQSTEGSAPTPWCSR 277
           ++KE GE+E   +G   T W  +
Sbjct: 575 RVKERGEIEVKGKGIMKTYWLEK 597


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 371 AQSRISARRTPTSRNKPPHYTRSCKPP 451
           AQ R + RRTP   ++     R   PP
Sbjct: 174 AQIRRNERRTPDPHDETAKKPRVLSPP 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.123    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,439
Number of Sequences: 438
Number of extensions: 2129
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)