Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F05
         (571 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   4.0  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   9.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.3  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 312 EPHKIPPQPAV*QKNKNLHE 253
           EP+  P +P V +KNK L E
Sbjct: 334 EPYPHPCRPTVDEKNKQLQE 353


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 176 YFLLVTNKIIQH 211
           YFLLVT+  +QH
Sbjct: 659 YFLLVTSNAVQH 670


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 176 YFLLVTNKIIQH 211
           YFLLVT+  +QH
Sbjct: 659 YFLLVTSNAVQH 670


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,309
Number of Sequences: 2352
Number of extensions: 9033
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)