Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F05
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.53 
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       24   0.92 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    24   0.92 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    24   0.92 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 424 LLIQGSPPAHLFYSLTS*Y*YAIFIFDSYCVIHFFMLRTAQNST 293
           LLI G PP    Y + S + Y     +++C+I  F   T+ N+T
Sbjct: 102 LLISGLPPE--IYYIWSHFPYVFG--EAFCIIQSFAAETSANAT 141


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 369 INMRYLFLIVIV*YIFLCCEPHKIPPQPA 283
           +N+  +F++V + YI+   EP   P   A
Sbjct: 5   VNVALVFMVVYISYIYAAPEPEPAPEPEA 33


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 458 KVLVESSPEARSAHTRLSSRTLVLFFNFMI 369
           K LV +  + RSA  R++     +FF F++
Sbjct: 264 KSLVSNQDKERSAEVRIAKVAFTIFFLFLL 293


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 458 KVLVESSPEARSAHTRLSSRTLVLFFNFMI 369
           K LV +  + RSA  R++     +FF F++
Sbjct: 264 KSLVSNQDKERSAEVRIAKVAFTIFFLFLL 293


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 128 THRLYA*YKLARNYFLYFLLVTNKIIQHLI 217
           TH  Y  Y+L+R Y    +L    II H+I
Sbjct: 766 THHEYD-YELSRGYIDEKILENQNIITHMI 794


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 373 MKLKNKTSVREESLV*AERASGEDSTSTLF 462
           +KLKN+T+ R E  V    A GE     L+
Sbjct: 781 IKLKNQTARRGEPAVLQCEAQGEKPIGILW 810


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,347
Number of Sequences: 438
Number of extensions: 3242
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)