Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F04
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.     276   5e-76
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.       226   4e-61
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    25   2.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.7  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   8.1  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   8.1  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score =  276 bits (676), Expect = 5e-76
 Identities = 136/136 (100%), Positives = 136/136 (100%)
 Frame = +1

Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
           MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
           LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 475 MPKDIQLARRIRGERA 522
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score =  226 bits (553), Expect = 4e-61
 Identities = 110/115 (95%), Positives = 113/115 (98%)
 Frame = +1

Query: 121 RTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELL 300
           RTKQTARKSTGGKAPRKQLA KAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELL
Sbjct: 1   RTKQTARKSTGGKAPRKQLARKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL 60

Query: 301 IRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 465
           IRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 61  IRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 115


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +2

Query: 20  DHCVRCCGICYKSN-FSTIL 76
           D   +CCG CY+ N + T+L
Sbjct: 58  DEVFKCCGPCYQLNCYGTVL 77


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 348  VLSNFSNESLERQLADQQLRRFLIATNFSKRYS 250
            +LSNF + SL    AD +  +   A N   R+S
Sbjct: 1029 LLSNFGSSSLSAPTADNETNKIAEAFNRISRFS 1061


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 53  YNKFHNNEHND 21
           YN+FHNN + D
Sbjct: 345 YNRFHNNVYRD 355


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 53  YNKFHNNEHND 21
           YN+FHNN + D
Sbjct: 345 YNRFHNNVYRD 355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,853
Number of Sequences: 2352
Number of extensions: 10928
Number of successful extensions: 67
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)