Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_F03
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 200 7e-52
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 197 5e-51
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 190 6e-49
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 159 2e-39
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 158 3e-39
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 146 1e-35
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 136 1e-32
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 124 4e-29
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 124 7e-29
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 121 5e-28
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 37 0.011
12_02_1179 - 26720533-26721021,26721329-26722597 30 1.6
04_01_0425 + 5609819-5610331,5610450-5610664,5612720-5612959,561... 29 2.8
08_02_0860 + 21970888-21971833,21973400-21974127 29 3.8
05_03_0095 - 8349971-8350171,8350659-8351303 28 5.0
03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093 28 5.0
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 28 6.6
06_01_0724 + 5299278-5299542,5299690-5299950,5300246-5300351,530... 28 6.6
12_01_0478 + 3752617-3753006,3753708-3753780,3753892-3753959,375... 27 8.7
07_03_1450 + 26620178-26620456,26622122-26622775 27 8.7
07_01_0305 - 2181727-2184793,2185635-2185945 27 8.7
05_07_0041 + 27261968-27262145,27262160-27262717,27262814-27263589 27 8.7
05_06_0098 + 25560158-25560925 27 8.7
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 200 bits (488), Expect = 7e-52
Identities = 95/170 (55%), Positives = 122/170 (71%)
Frame = +1
Query: 85 IAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRATRA 264
+ E+D MVARGDLG+EIP EK+FLAQK MI +CN GKPV+ ATQMLESM+K PR TRA
Sbjct: 255 LRETDAFMVARGDLGMEIPVEKIFLAQKMMIYKCNLAGKPVVTATQMLESMIKSPRPTRA 314
Query: 265 EISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNELVAEVT 444
E +DVANA+LDG DCVMLSGE+A G YP V MA IC EAE+++ + +F E++
Sbjct: 315 EATDVANAVLDGTDCVMLSGESAAGAYPEVAVKIMARICVEAESSLDNEAVFKEMIRSAP 374
Query: 445 APIDPAHSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPIIAV 594
P+ P S A +AV + K A+ IVV+T G + L++KYRPR PI++V
Sbjct: 375 LPMSPLESLASSAVRTANKAKAALIVVLTRGGTTAKLVAKYRPRVPILSV 424
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 9 GEQRKNIKIISKIENHPGMVNLDEIYR 89
G+ K IK++SK+EN G+VN DEI R
Sbjct: 230 GQHAKRIKLMSKVENQEGVVNFDEILR 256
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 197 bits (481), Expect = 5e-51
Identities = 94/170 (55%), Positives = 119/170 (70%)
Frame = +1
Query: 85 IAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRATRA 264
+A+SD MVARGDLG+EIP EK+F AQK MI +CN GKPV+ ATQMLESM+K PR TRA
Sbjct: 347 LAQSDAFMVARGDLGMEIPIEKIFYAQKVMIFKCNIQGKPVVTATQMLESMIKSPRPTRA 406
Query: 265 EISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNELVAEVT 444
E +DVANA+LDG DCVMLSGETA G YP V TMA IC +AE+ + H +F + A
Sbjct: 407 EATDVANAVLDGTDCVMLSGETAAGAYPELAVRTMAKICLQAESCVDHAAVFKSITASAP 466
Query: 445 APIDPAHSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPIIAV 594
P+ P S A +AV + A+ I+V+T G + L++KYRP PI++V
Sbjct: 467 IPMSPLESLASSAVRTANSAKAALILVLTRGGTTARLVAKYRPSMPILSV 516
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 9 GEQRKNIKIISKIENHPGMVNLDEI 83
G+ K+I ++SK+EN G+ N D+I
Sbjct: 322 GKHAKSIMLMSKVENQEGVANFDDI 346
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 190 bits (464), Expect = 6e-49
Identities = 94/170 (55%), Positives = 117/170 (68%)
Frame = +1
Query: 85 IAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRATRA 264
IA SD MVARGDLG+EIP EK+F AQK MI +CN GKPV+ ATQMLESM+K P TRA
Sbjct: 238 IANSDAFMVARGDLGMEIPIEKIFYAQKVMIHKCNIHGKPVVTATQMLESMIKSPCPTRA 297
Query: 265 EISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNELVAEVT 444
E +DVANA+LDG DCVM SGETA G YP V TMANIC AE + + +F +L +E
Sbjct: 298 EATDVANAVLDGTDCVMFSGETAAGAYPELAVQTMANICSRAELYLDYPFIFKKLSSEAP 357
Query: 445 APIDPAHSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPIIAV 594
P+ P S A +AV+ + AS I+V+T G + L++KYRP P++ V
Sbjct: 358 VPLSPLESLASSAVQTANISKASLILVLTRGGTTARLIAKYRPAMPVLFV 407
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 9 GEQRKNIKIISKIENHPGMVNLDEI 83
GE K+I ++SK+EN G+ N+DEI
Sbjct: 213 GEHAKSILLMSKVENQEGVANVDEI 237
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 159 bits (386), Expect = 2e-39
Identities = 75/170 (44%), Positives = 112/170 (65%)
Frame = +1
Query: 85 IAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRATRA 264
+ E+DGI+++RG+LGI++PPEKVFL QK+ + +CN GKP + T++++SM R TRA
Sbjct: 242 LQEADGIILSRGNLGIDLPPEKVFLFQKSALHKCNMAGKPAV-VTRVVDSMTDNLRPTRA 300
Query: 265 EISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNELVAEVT 444
E +DVANA+LDG+D ++L ET +G YP+E + + IC EAE F V V
Sbjct: 301 EATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKRTVKHVG 360
Query: 445 APIDPAHSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPIIAV 594
P+ S A +AV A+ K AS I+ T+SG++ L++KYRP P+++V
Sbjct: 361 EPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 410
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 158 bits (384), Expect = 3e-39
Identities = 75/170 (44%), Positives = 112/170 (65%)
Frame = +1
Query: 85 IAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRATRA 264
+ E+DGI+++RG+LGI++PPEKVFL QK+ + +CN GKP + T++++SM R TRA
Sbjct: 242 LQEADGIILSRGNLGIDLPPEKVFLFQKSALHKCNMAGKPAV-VTRVVDSMTDNLRPTRA 300
Query: 265 EISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNELVAEVT 444
E +DVANA+LDG+D ++L ET +G YP+E + + IC EAE F V V
Sbjct: 301 EATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKRTVKYVG 360
Query: 445 APIDPAHSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPIIAV 594
P+ S A +AV A+ K AS I+ T+SG++ L++KYRP P+++V
Sbjct: 361 EPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 410
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 146 bits (354), Expect = 1e-35
Identities = 75/170 (44%), Positives = 113/170 (66%)
Frame = +1
Query: 85 IAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRATRA 264
+ E+DG++++RGDLGI++PPE VF++QKT I +CN GKPVI T++++SM+ R TRA
Sbjct: 269 LQEADGVIISRGDLGIDLPPEDVFISQKTAIKKCNLAGKPVI-ITRVVDSMIDNLRPTRA 327
Query: 265 EISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNELVAEVT 444
E +DVANA+LDG D ++L ET +G YP++ ++ N + H F +LV V
Sbjct: 328 EATDVANAVLDGTDGILLGAETHRGPYPVDAAESVYN-------QLVH---FKKLVKHVG 377
Query: 445 APIDPAHSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPIIAV 594
P+ S A +AV + K A+AIVV T SG++ L++KY+P P++AV
Sbjct: 378 DPMPHEESVASSAVRTAMKVKAAAIVVFTFSGRAARLVAKYKPPMPVLAV 427
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 136 bits (329), Expect = 1e-32
Identities = 78/183 (42%), Positives = 108/183 (59%), Gaps = 8/183 (4%)
Frame = +1
Query: 73 LMRFIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPR 252
L IA SDG MVARGDLG E+P E+V L Q+ ++ C + KPVI AT MLESM+ P
Sbjct: 327 LQSIIAASDGAMVARGDLGAELPIEEVPLLQEEIVRTCRSMQKPVIVATNMLESMIDHPT 386
Query: 253 ATRAEISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNELV 432
TRAE+SD+A A+ +G+D +MLSGETA G +PL+ V M + + E+++++ LV
Sbjct: 387 PTRAEVSDIAIAVREGSDAIMLSGETAHGKFPLKAVKVMHTVAQRTESSLYNPTTSPSLV 446
Query: 433 AEVTAPIDPAHST--------AIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPII 588
A A ++ S + A + A+T C + I+V T +G LLS YRP I
Sbjct: 447 AHPQALLNEEFSQSQLSKMFGSHATMMANTLC--TPIIVFTRTGSMAVLLSHYRPSSTIF 504
Query: 589 AVT 597
A T
Sbjct: 505 AFT 507
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 124 bits (300), Expect = 4e-29
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Frame = +1
Query: 73 LMRFIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPR 252
L I SDG MVARGDLG E+P E+V L Q+ +I C +GK VI AT MLESM+ P
Sbjct: 362 LHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRMCRSMGKAVIVATNMLESMIVHPT 421
Query: 253 ATRAEISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNELV 432
TRAE+SD+A A+ +G+D +MLSGETA G +PL+ V M + EA + E
Sbjct: 422 PTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATM----SGGETP 477
Query: 433 AEVTAPIDPAHSTAIAAVEAS--TKCLASAIVVITTSGKSXHLLSKYRPRCPIIAVT 597
A + + H + + A ++ + L ++IVV T +G LLS YRP I A T
Sbjct: 478 ANL-GQVFKNHMSEMFAYHSTMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFT 533
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 124 bits (298), Expect = 7e-29
Identities = 68/178 (38%), Positives = 103/178 (57%), Gaps = 3/178 (1%)
Frame = +1
Query: 73 LMRFIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPR 252
L I SDG MVARGD+G +IP E+V Q+ ++ C ++ KPVI A+Q+LESM++ P
Sbjct: 336 LEEIIRASDGAMVARGDMGAQIPLEQVPSVQQKIVKLCRQLNKPVIVASQLLESMIEYPT 395
Query: 253 ATRAEISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQLFNEL- 429
TRAE++DV+ A+ AD +MLSGE+A G YP + + + ++ E + EL
Sbjct: 396 PTRAEVADVSEAVRQRADALMLSGESAMGRYPEKALSVLRSVSLRIEKWWREEKRHEELE 455
Query: 430 VAEVTAPIDP--AHSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPIIAVT 597
+ +V++ + I+A + + K A+ V T +G LLS+ RP CPI A T
Sbjct: 456 LKDVSSSFSDKISEEICISAAKMANKLEVDAVFVYTNTGHMASLLSRCRPDCPIFAFT 513
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 121 bits (291), Expect = 5e-28
Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
Frame = +1
Query: 73 LMRFIAESDGIMVARGDLGIEIPPEKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPR 252
L I SDG+MVARGDLG++IP E++ Q+ ++ C R+ KPVI A+Q+LESMV+ P
Sbjct: 915 LKDIIEASDGVMVARGDLGVQIPLEQIPAIQEAIVDLCRRLNKPVIVASQLLESMVEYPT 974
Query: 253 ATRAEISDVANAILDGADCVMLSGETAKGDYPLECVLTMANICKEAEAAIWHRQ-----L 417
TRAE++DV+ A+ AD VMLS E+A G YP + + + + E+ W R+ L
Sbjct: 975 PTRAEVADVSEAVRQYADAVMLSAESAIGAYPQKALAVLRAASERMES--WSREENMQKL 1032
Query: 418 FNELVAEVTAPIDPAHSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYRPRCPIIAVT 597
+ + P + +A E + AI V T G LLS+ RP PI A T
Sbjct: 1033 LPQHQLAIALPDRISEQICTSAAEMANNLAVDAIFVYTKYGHMASLLSRNRPNPPIFAFT 1092
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 37.1 bits (82), Expect = 0.011
Identities = 27/85 (31%), Positives = 46/85 (54%)
Frame = -3
Query: 500 FVDASTAAIAVECAGSIGAVTSATSSLKSCLCQMAASASLHIFAIVSTHSSG*SPLAVSP 321
F+ A TAA AV A ++ AV +T+S S ++ + ASL ++ S +++ +P + S
Sbjct: 4 FLRALTAASAVPAAAAVAAVALSTNSSSSSRLRLPSPASLP--SLSSAYAA--APASGSA 59
Query: 320 DSMTQSAPSSMAFATSDISARVARG 246
P + A AT+D+SA +G
Sbjct: 60 RKPNAVPPMAAAAATADLSAAADKG 84
>12_02_1179 - 26720533-26721021,26721329-26722597
Length = 585
Score = 29.9 bits (64), Expect = 1.6
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 172 MIARCNRVG-KPVICATQMLESMVKKPRATRAEISDVANAILDG-ADCVMLSGETAKGDY 345
M++ N VG V+CA L V P AT A S + ++ ADC+M T
Sbjct: 75 MMSSRNAVGCSKVVCA---LSRYVVDPLATEALKSAIIGSLCRPFADCLM---STKVESN 128
Query: 346 PLECVLTMANICKEAEAAIWHRQLFNELVAEVTAPIDPAHSTAIAAVEASTKCLASAIVV 525
L +A + + +L N++ +V+ ++ AH+ +IA + L ++
Sbjct: 129 SFGSALCVAALVQSNNWRFASNELVNDVCLKVSGALEEAHAQSIAHLNLVVVLLTQNPLM 188
Query: 526 ITTSGKS 546
+ G+S
Sbjct: 189 LEPYGRS 195
>04_01_0425 +
5609819-5610331,5610450-5610664,5612720-5612959,
5613122-5613232,5613789-5613987,5614097-5614453
Length = 544
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 488 STAAIAVECAGSIGAVTSATSSLKSCLCQMAASASLHIFAIVS-THSSG*SPLAVSPDSM 312
S+ A+ A ++ AVT T + S LC AA++ + I V T SG P D++
Sbjct: 183 SSTGPAIAAAANMAAVTVGTETTASILCPAAANSVVGIKPTVGLTSRSGVIPFTTRQDTV 242
>08_02_0860 + 21970888-21971833,21973400-21974127
Length = 557
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -2
Query: 204 RLTDPVAACNHSLLRQEHLLWWDLDTKVTTSYHYT-VGFGDKSHQGS-PFLGDFRSW 40
RL+ +A C L L W + T ++SY T G SH G+ D RSW
Sbjct: 88 RLSSAIADCLDLLDLSSDELSWSMSTTSSSSYQPTNAGAATSSHVGTGDARSDLRSW 144
>05_03_0095 - 8349971-8350171,8350659-8351303
Length = 281
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 493 STKCLASAI-VVITTSGKSXHLLSKYRPRCPIIAVT 597
+ C+ +A+ +++ G + L YRP+ P IAVT
Sbjct: 26 AASCVVAALFILLAAGGAAAALFLLYRPQAPAIAVT 61
>03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093
Length = 435
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 510 LRHRGDHHQRQVRPL 554
L HRGDHH ++ RPL
Sbjct: 322 LFHRGDHHHQRARPL 336
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 3 TRGEQRKNIKIISKIENHPGMVNLDEIYRRIRRYNGSSW*PWYRDPTREGVPGAEDYDCT 182
+RG R++ S H G + D R +RR S + + P + D+ +
Sbjct: 83 SRGRGRRSGDATSASSRHGGG-HADHAVRDVRRGGNVSTQQHHHRGRGQASPSSADHAAS 141
Query: 183 LQQGR*AGDMRHANARVYGE 242
+GR GD ++ RV G+
Sbjct: 142 RGRGRCGGDANSSSPRVAGQ 161
>06_01_0724 +
5299278-5299542,5299690-5299950,5300246-5300351,
5300633-5300697,5300759-5301233,5302239-5302347,
5302432-5302710,5303025-5303231,5303319-5303468,
5304164-5304277
Length = 676
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 488 STAAIAVECAGSIGAVTS 435
S A+AV+C G IGA+TS
Sbjct: 65 SGLAVAVDCVGGIGAITS 82
>12_01_0478 +
3752617-3753006,3753708-3753780,3753892-3753959,
3754577-3754665,3755108-3755305,3755383-3755527,
3755673-3755840,3756174-3756341,3756527-3756717,
3757128-3757266
Length = 542
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 463 HSTAIAAVEASTKCLASAIVVITTSGKSXHLLSKYR 570
HS+ +AA++ S CL S + V T G H L +R
Sbjct: 435 HSSRLAALDYSV-CLPSEVFVTTQGGNFPHFLMGHR 469
>07_03_1450 + 26620178-26620456,26622122-26622775
Length = 310
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 477 RRR*GVDKVPRLRHRGDHHQRQVRPLAQQVPAPVSHH 587
RR+ P + H+ HH + P + P P HH
Sbjct: 123 RRKSSQPPPPPMPHQPYHHHHHLNPFSLPPPPPAYHH 159
>07_01_0305 - 2181727-2184793,2185635-2185945
Length = 1125
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 30 KIISKIENHPGMVNLDEIYRRI 95
K +S +EN+P NLDE+ R I
Sbjct: 475 KAVSLVENYPSNGNLDEVIRSI 496
>05_07_0041 + 27261968-27262145,27262160-27262717,27262814-27263589
Length = 503
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 515 AEARHFVDASTAAIAVECAGSIGAVTSATSSLKSCLCQMAASASL--HIFAIVSTHSSG* 342
A H A TAAIA + A TS +S L AAS ++ A+++ +SG
Sbjct: 133 ATGSHVAAAITAAIASSTCALVTATTSVITSTTGALFATAASGAIASSTGALLAATTSGG 192
Query: 341 SPLAVSPDSMTQSAPS 294
P + + ++T S S
Sbjct: 193 IP-STTGSTITSSTRS 207
>05_06_0098 + 25560158-25560925
Length = 255
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/91 (24%), Positives = 38/91 (41%)
Frame = -3
Query: 512 EARHFVDASTAAIAVECAGSIGAVTSATSSLKSCLCQMAASASLHIFAIVSTHSSG*SPL 333
E R V + IA + A +++S K+ Q + S + S S +PL
Sbjct: 121 ERRSGVHKNFKMIAPLAMAAAAAAGASSSPRKAAQHQQQEALSPSVLDFPSLALSPVTPL 180
Query: 332 AVSPDSMTQSAPSSMAFATSDISARVARGFF 240
P + + ++ SS A + +A +GFF
Sbjct: 181 VADPFNRSPASASSSASPEEEAAAIAQKGFF 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,916,681
Number of Sequences: 37544
Number of extensions: 330592
Number of successful extensions: 1252
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -