Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_F02
(628 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 145 5e-35
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 145 5e-35
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 145 5e-35
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 145 5e-35
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 145 5e-35
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 41 0.001
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 41 0.001
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 32 0.73
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 32 0.73
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 32 0.73
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 145 bits (351), Expect = 5e-35
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAG 506
TA LFK+LEKYRPE+ D P K+P+ + AG
Sbjct: 96 TAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAG 144
Score = 83.8 bits (198), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 478 RKGQTPYALGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
+K + + GTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGV
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGV 184
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 145 bits (351), Expect = 5e-35
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAG 506
TA LFK+LEKYRPE+ D P K+P+ + AG
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAG 144
Score = 83.8 bits (198), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 478 RKGQTPYALGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
+K + + GTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGV
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGV 184
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 145 bits (351), Expect = 5e-35
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAG 506
TA LFK+LEKYRPE+ D P K+P+ + AG
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAG 144
Score = 83.8 bits (198), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 478 RKGQTPYALGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
+K + + GTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGV
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGV 184
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 145 bits (351), Expect = 5e-35
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAG 506
TA LFK+LEKYRPE+ D P K+P+ + AG
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAG 144
Score = 83.8 bits (198), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 478 RKGQTPYALGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
+K + + GTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGV
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGV 184
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 145 bits (351), Expect = 5e-35
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAG 506
TA LFK+LEKYRPE+ D P K+P+ + AG
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAG 144
Score = 83.8 bits (198), Expect = 2e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 478 RKGQTPYALGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
+K + + GTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGV
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGV 184
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 505 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
G N TK + + A +VV+A D +PIE++L LP LC V
Sbjct: 37 GANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNV 77
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 505 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
G N TK + + A +VV+A D +PIE++L LP LC V
Sbjct: 37 GANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNV 77
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 505 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
G V + K + + + A DV P++++ LPA+C + G+
Sbjct: 70 GLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGI 110
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 505 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
G V + K + + + A DV P++++ LPA+C + G+
Sbjct: 70 GLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGI 110
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 505 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 627
G V + K + + + A DV P++++ LPA+C + G+
Sbjct: 70 GLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGI 110
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,878,154
Number of Sequences: 53049
Number of extensions: 484363
Number of successful extensions: 1059
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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