Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F01
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.86 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   1.5  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   3.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 222 TNVISEEVILKWYREPNSSKG 284
           TN+IS+E I+ W R  + +KG
Sbjct: 505 TNIISQEQIISW-RSSDDAKG 524


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 584 SLEQITNHYKTIIKNGGW 531
           +L++I  + KTII  GGW
Sbjct: 88  ALKEINPNLKTIISIGGW 105


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 8   IGTRVTRRVEQEGGVTSR 61
           +GT +T  +++EGG TS+
Sbjct: 91  VGTALTFCLQEEGGTTSQ 108


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 441 GYIQTHRQTDRQEFKPADGAVNLPEP 518
           G  ++H+   + + +PA  + N PEP
Sbjct: 245 GSSRSHQPATKSKPRPAPASRNAPEP 270


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 45  EELLAEQAAKHPRHYTPLLAAFAQSAKAELALLS 146
           +++L E AA+H   +  L+     + KAE  L++
Sbjct: 183 DKVLDENAAEHREQFVSLVRELRGAFKAENLLVT 216


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 117 TAQTPPTAVCNVGDAWPLARLVTPP 43
           T QTP T +    + W L     PP
Sbjct: 309 TVQTPTTVMSPTINCWSLTSSPPPP 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,287
Number of Sequences: 336
Number of extensions: 2035
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)