Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_F01
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.3  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.3  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 179 LHARLQQTSADAVQDQRDLRGGDPQVVPRAELLQGQDDVPRS 304
           L  R +Q+  +AVQ  R     D +    +E    +   PRS
Sbjct: 227 LRERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRS 268


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 179 LHARLQQTSADAVQDQRDLRGGDPQVVPRAELLQGQDDVPRS 304
           L  R +Q+  +AVQ  R     D +    +E    +   PRS
Sbjct: 227 LRERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRS 268


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 408 PCQSHSLHLYYINPRLHRSQILLQRS 331
           P +   L +Y  +  LH  Q+L Q+S
Sbjct: 61  PPEHRDLPIYQSHHHLHHHQVLYQQS 86


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 179 LHARLQQTSADAVQDQRDLRGGDPQVVPRAELLQGQDDVPRS 304
           L  R +Q+  +AVQ  R     D +    +E    +   PRS
Sbjct: 227 LRERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRS 268


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 66  AAKHPRHYTP 95
           A++HP HY P
Sbjct: 427 ASRHPMHYLP 436


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,391
Number of Sequences: 438
Number of extensions: 2419
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)