Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E24
(366 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 124 9e-29
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 124 9e-29
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 124 9e-29
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 124 9e-29
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 124 9e-29
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 124 9e-29
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 124 9e-29
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 124 9e-29
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 124 9e-29
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 124 9e-29
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 115 5e-26
BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein. 32 0.65
BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein. 32 0.65
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 32 0.65
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 32 0.65
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 32 0.65
M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein... 31 1.1
CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein. 31 1.1
BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding prote... 31 1.1
AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein pr... 31 1.1
L05425-1|AAC37588.1| 731|Homo sapiens nucleolar GTPase protein. 28 8.0
BC009250-1|AAH09250.1| 731|Homo sapiens guanine nucleotide bind... 28 8.0
BC000107-1|AAH00107.1| 731|Homo sapiens guanine nucleotide bind... 28 8.0
AL513220-1|CAI15784.1| 731|Homo sapiens guanine nucleotide bind... 28 8.0
AL034379-1|CAI20546.1| 731|Homo sapiens guanine nucleotide bind... 28 8.0
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 124 bits (299), Expect = 9e-29
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +3
Query: 9 RNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDML 188
RNKIAG+ THLM+R+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 189 KMLDFSNINGLQLTQP 236
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 115 bits (276), Expect = 5e-26
Identities = 52/75 (69%), Positives = 64/75 (85%)
Frame = +3
Query: 12 NKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLK 191
NK AG+ THLM+++ VRGISIKLQEE RERRDNYVPE+SAL+Q+IIEVD DTK+MLK
Sbjct: 48 NKTAGYVTHLMKQIQRGPVRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEMLK 107
Query: 192 MLDFSNINGLQLTQP 236
+LDF ++ LQ+TQP
Sbjct: 108 LLDFGGLSNLQVTQP 122
>BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 90 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 90 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 90 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 90 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 90 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein
isoform II protein.
Length = 591
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 48 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 185
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein.
Length = 591
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 48 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 185
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding protein
2, interferon-inducible protein.
Length = 591
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 48 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 185
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 48 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 185
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>L05425-1|AAC37588.1| 731|Homo sapiens nucleolar GTPase protein.
Length = 731
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 54 IHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+ ++ S + +EE+ ++RD+ E S+ E + V +DTK ++K LD
Sbjct: 555 LEEELESFSDEEEEEQEQQRDD--AEESSSEPEEENVGNDTKAVIKALD 601
>BC009250-1|AAH09250.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 54 IHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+ ++ S + +EE+ ++RD+ E S+ E + V +DTK ++K LD
Sbjct: 555 LEEELESFSDEEEEEQEQQRDD--AEESSSEPEEENVGNDTKAVIKALD 601
>BC000107-1|AAH00107.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 54 IHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+ ++ S + +EE+ ++RD+ E S+ E + V +DTK ++K LD
Sbjct: 555 LEEELESFSDEEEEEQEQQRDD--AEESSSEPEEENVGNDTKAVIKALD 601
>AL513220-1|CAI15784.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 54 IHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+ ++ S + +EE+ ++RD+ E S+ E + V +DTK ++K LD
Sbjct: 555 LEEELESFSDEEEEEQEQQRDD--AEESSSEPEEENVGNDTKAVIKALD 601
>AL034379-1|CAI20546.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 54 IHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 200
+ ++ S + +EE+ ++RD+ E S+ E + V +DTK ++K LD
Sbjct: 555 LEEELESFSDEEEEEQEQQRDD--AEESSSEPEEENVGNDTKAVIKALD 601
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,592,842
Number of Sequences: 237096
Number of extensions: 724131
Number of successful extensions: 2048
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2048
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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