Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E22
(582 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 33 0.040
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 31 0.093
SPCC1235.04c |||FAD synthetase|Schizosaccharomyces pombe|chr 3||... 31 0.12
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 0.37
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 29 0.50
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 28 0.87
SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces pom... 28 0.87
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 28 1.1
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 28 1.1
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 27 1.5
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 1.5
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 27 2.0
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 27 2.0
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 27 2.0
SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces ... 27 2.0
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 27 2.6
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 3.5
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 3.5
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 4.6
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 26 4.6
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 26 4.6
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 26 4.6
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 25 8.1
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 25 8.1
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 8.1
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 25 8.1
SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.1
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 25 8.1
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 25 8.1
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 32.7 bits (71), Expect = 0.040
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = +2
Query: 200 QHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTV-RPRSKSLQN 376
+ +SRQ+S T ++ +I DKK +RP RH + + +++ + +S+++
Sbjct: 784 EQMSRQSSQPSTVSTILQIP------DKKFHRPFPRHLHRYVGRSASESLTSEKDESIKS 837
Query: 377 SVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSPQYAEPKDSDSSSYDLPA 556
I + I ++ + NQ+HE +N EN + + +S +++D+P
Sbjct: 838 MKGIDDFANLEIPGKGIESNVVIK-DISNQTHE-INSVENKAETVS--NNSKITNFDIPN 893
Query: 557 SMTDLP 574
T LP
Sbjct: 894 DATSLP 899
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 31.5 bits (68), Expect = 0.093
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 413 SRSNISADTSRSVPVCNQSHETVNQTENGSPQYAEPKDSDSSSYDLPASMTDLP 574
SR +SA + +P Q + NG Q+++ ++ D S L +S TD+P
Sbjct: 215 SRQKLSAAMNEDIPPWRQPSKNSQTLSNGDLQHSKVQNVDQKSGFLTSSETDVP 268
>SPCC1235.04c |||FAD synthetase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 265
Score = 31.1 bits (67), Expect = 0.12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 390 EMSTEFCKLFDRGRTVCGGVS 328
E +T++C L+DRG T GGVS
Sbjct: 186 ETNTKYCSLYDRGYTSLGGVS 206
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 29.5 bits (63), Expect = 0.37
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +2
Query: 116 DQMRDIDAAHFANAAGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYR 295
++M + ++ + A P + + +R+ ++ YNSHR +R K D++ Y
Sbjct: 65 EEMEQAETSYAYDTAAHDDPVQRQLEEDERCARELAN--RYNSHRPERRRKTNNDRRNYP 122
Query: 296 PVRR 307
P R
Sbjct: 123 PQNR 126
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 29.1 bits (62), Expect = 0.50
Identities = 31/140 (22%), Positives = 50/140 (35%)
Frame = +2
Query: 158 AGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETP 337
A P + A N P +R+TSS +SH + P+ R + P
Sbjct: 558 ATPLSSAPNPPSVMPTYARKTSSHSERSSHSSYHNSSHVPTAAFNSPIMRTSTKSTSPIP 617
Query: 338 PQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSPQYAE 517
+ +S SLQ+ + I S +VP S+ + N GS
Sbjct: 618 ARPFYAQSGSLQSLNTTQHSHQISGGHSG-----RMNVPYAKLSYTSHNGRHGGSNGNIS 672
Query: 518 PKDSDSSSYDLPASMTDLPI 577
+ ++Y + SM LP+
Sbjct: 673 GAKTPMTNYTI-NSMPSLPV 691
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.3 bits (60), Expect = 0.87
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 270 LSAIRKCTGR*GDIPCLESTRRLRRRSGPDQRACRTRLTSRP 395
+S+ R CT R +PCL+ + PDQ T T+ P
Sbjct: 526 ISSSRDCTIRLWSLPCLDDPPFVNVNENPDQNNDFTSATTNP 567
>SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 605
Score = 28.3 bits (60), Expect = 0.87
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 208 LPANLLHRHVQLPPEDQKTETY 273
L NLL R+V LPP+ ++T TY
Sbjct: 68 LMLNLLRRYVGLPPKSKETGTY 89
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 27.9 bits (59), Expect = 1.1
Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 3/132 (2%)
Frame = +2
Query: 182 NNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRP-- 355
N+P S H++R SS+ ++S + K P +RH L + + P
Sbjct: 22 NHP--SNHIARAKSSL--HSSENSLVNGKKATVSSTNVPKKRHALDDVSNFHNKEGVPLA 77
Query: 356 -RSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSPQYAEPKDSD 532
++ +++++ STR L +S I A + N + PQ+ K
Sbjct: 78 SKNTNVRHTTASVSTRRALEEKSIIPATDDEPASKKRRQPSVFNSSVPSLPQHLSTKSHS 137
Query: 533 SSSYDLPASMTD 568
S++ + A D
Sbjct: 138 VSTHGVDAFHKD 149
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 296 PVRRHTLSRIDETPPQTVRPRSKSLQNSVDISSTRPILRSRS 421
P+ RHT ++ T V+P S + + +S +P L + S
Sbjct: 340 PIPRHTKPKLSTTQSTPVKPASLQSEEDIQLSFKQPELSASS 381
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 1.5
Identities = 25/111 (22%), Positives = 48/111 (43%)
Frame = +2
Query: 215 QTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKSLQNSVDISS 394
Q + + Y R +KR + KK ++ ++ SR + + + + +
Sbjct: 9 QRNDVQKYPITRFVKRKSNVVLKKNKGAMKSNSNSRSRGNK----KLKESQFSSRDNFRT 64
Query: 395 TRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSPQYAEPKDSDSSSYD 547
T+ S S S +T+R VPV + T + E+ + + KDS S +Y+
Sbjct: 65 TQTQASSSSEPSDNTNRLVPVVIIDNNTPKKEESNAEKLKLDKDSSSVNYE 115
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 1.5
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +2
Query: 359 SKSLQNSVDISSTRPILRSRSNISADTSRSVPV---CNQSHETVNQTENGSPQYAEPKDS 529
S S +S SS+ S S+ S+ +S SVP+ + SH + + + + S + P S
Sbjct: 178 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSS 237
Query: 530 DS 535
S
Sbjct: 238 SS 239
Score = 25.4 bits (53), Expect = 6.1
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 359 SKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSPQYAEPKDSDSS 538
S S + S+T S S+ S+ +S S + S + + + + S + S SS
Sbjct: 138 SSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 197
Query: 539 SYDLPASMTDLPI 577
S +S + +PI
Sbjct: 198 SSSSSSSSSSVPI 210
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 380 VDISSTRPILRSRSNISADTSRSV 451
+D+SST+ +LRS S I DT R++
Sbjct: 848 LDLSSTKSLLRSLSLIEDDTVRNI 871
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 27.1 bits (57), Expect = 2.0
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = +2
Query: 134 DAAHFANAAGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHT 313
++A+ +N+ + N PP +Q LS SSI T N+ + + L+ R
Sbjct: 127 NSAYNSNSFEGTGSSPNFPPQNQFLSDSRSSIATLNAIPSLDQSVLLNPNLRARTPSLVP 186
Query: 314 LSRIDETPPQTVRPRSKSLQNSVDISS 394
D+T ++V +S S NS+ +S
Sbjct: 187 EHYFDDT-DKSVHSKSSSGSNSLSEAS 212
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 27.1 bits (57), Expect = 2.0
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 311 TLSRIDETPPQTVRPRSKSLQNSV---DISSTRPILRSRSNISADTSRSVPVCNQSHETV 481
+LS TP +P ++++ + + T+P +++N+ + + + Q ET
Sbjct: 697 SLSAKASTPFSFAKPNTENVTTTAPQFSFNFTKPNTDAKTNLLPEKTFNEEAVKQK-ETE 755
Query: 482 NQTENGSPQYAEPKDSDSSSYDLPAS 559
+ P+ +E KDS SS+ +P+S
Sbjct: 756 KEVPPTGPKASEIKDSVSSNNAVPSS 781
>SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 2.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 365 SLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQT 490
+L+N I++T+P+L S IS+ TS + V E V QT
Sbjct: 145 ALENGTVITATKPLLISHHRISSITSTAKWVLVIEKEAVFQT 186
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 26.6 bits (56), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 335 PPQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSPQYA 514
PP + RP++ N + + + I S +N A S P N G+P Y+
Sbjct: 45 PPPSTRPQTDGNSNQIPMENVGHISLSSANSHAYAPPSGPPPN-----TGANSYGNPNYS 99
Query: 515 EPK--DSDSSSYDL 550
P+ ++ + SY+L
Sbjct: 100 GPQLPNTQTQSYNL 113
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 3.5
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +2
Query: 401 PILRSR-SNIS---ADTSRSVPVCNQSHETVNQTENGSPQYAEPKDSDSSSYD 547
PIL S SNI +DT ++PV + ++E +++ G+P E SD S D
Sbjct: 97 PILNSATSNIRLTPSDTYNNIPVSDTNNEEISKNIYGAP-ILESTSSDFQSKD 148
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 26.2 bits (55), Expect = 3.5
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 1/124 (0%)
Frame = +2
Query: 173 PARNNPPTSQHLSRQTSSIDTYNSHRKIKRPK-LIGDKKVYRPVRRHTLSRIDETPPQTV 349
PA PP S+ ++T S + K + GD K L++ P++
Sbjct: 34 PATTTPPISRGNEDADEGLNTARSFSSFQDLKGMSGDAKEQESATLVHLTK-GRAHPRSR 92
Query: 350 RPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSPQYAEPKDS 529
RP Q S+D + + S +ADT SV + N S +P +S
Sbjct: 93 RPPR---QISIDSAKKEETKNTGSTKAADTKSSVEATISPLKDTKSPSNASVFPIKPTES 149
Query: 530 DSSS 541
+S+
Sbjct: 150 KTST 153
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.8 bits (54), Expect = 4.6
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +2
Query: 230 DTYNSHRKIK---RPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKSLQNSVDISSTR 400
D N +I+ RP +I + ++YR + R+ + R R + + VDI R
Sbjct: 810 DAKNEEHRIRDNQRP-VIEEIRIYREKIQTETQRLSSLQTELSRLRDEKRNSEVDIERHR 868
Query: 401 PILRSRSNISADTSRSVPVCNQ 466
+ S +NI + C Q
Sbjct: 869 QTVESCTNILREKEAKKVQCAQ 890
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 414 PGRTYRQTRVGACPFATRATKR*TRPKMVV 503
P T+R T +G CPF R + K +V
Sbjct: 309 PWPTFRATSIGRCPFVPETKYRLSTSKSLV 338
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 4.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 307 SPYRPVHFLIADKFRSFDLPVGVVR 233
S Y+P+++ D SFD+P V R
Sbjct: 515 SKYKPINYPKPDNVLSFDIPTSVSR 539
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 149 QSAPRLYPSSGRMLSSCKVRTGT 81
QS+P L P+SGR L+S R T
Sbjct: 342 QSSPYLVPNSGRTLNSENAREST 364
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 25.0 bits (52), Expect = 8.1
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +2
Query: 335 PPQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSPQYA 514
P T P + + Q ++ +T ++S + + P + SHE + PQ
Sbjct: 63 PRLTAAPNTHAQQANLQSGNTSITHETQSTSRGQEATTSPSLSASHEKPAR-----PQTG 117
Query: 515 EPKDSDSSSYDLPASMTDL 571
E D++ D+ A + DL
Sbjct: 118 EGSDNEDEDEDIDALIEDL 136
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.0 bits (52), Expect = 8.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 429 DMFDLDRNIGRVDEMSTEFCKL 364
D+ ++ RNIG + ++ T C+L
Sbjct: 132 DLEEISRNIGDIQQLETNQCRL 153
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.0 bits (52), Expect = 8.1
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +2
Query: 380 VDISSTRPILRS--RSNISADTSRSVPVCN--QSHETVNQTENGSPQYAEPKDSDSSS 541
++IS ILR R IS D+S+S V + +HE ++++ + + EP + SS
Sbjct: 121 LEISKDLKILRLPIRKQISKDSSQSQNVDSGKTNHEEIHESRHLQTEIEEPSGLEESS 178
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 25.0 bits (52), Expect = 8.1
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 140 AHFANAAGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLS 319
+H+++++GP P ++ +++ ++ S K P+ P ++ L+
Sbjct: 27 SHYSDSSGPSKPVSPFFKKERYKHHLETNVSSHQSATKFIEPE-------PSPTKKTKLT 79
Query: 320 RIDETPPQTVRPRSKSLQNSV---DISSTRPILRS 415
R D T P R R KSL V ++ R I+R+
Sbjct: 80 RRD-TRPLAERARPKSLDEYVGQEELVGERGIIRN 113
>SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 253
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 331 LVDSRQGMSPYRPVHFLIADKFRSF 257
++D+ +G SPY V L K RSF
Sbjct: 158 VIDASRGYSPYTSVDSLSVSKNRSF 182
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 25.0 bits (52), Expect = 8.1
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 344 TVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCN--QSHETVNQTENG 499
T+R SK+ VD+S+ + S++ DTS +V + N S E TE+G
Sbjct: 531 TLRKASKT--RIVDLSAPNSAVFSKNASGGDTSSNVSLLNGSASEEIPQNTESG 582
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 485 QTENGSPQYAEPKDSDSSSYDLPAS 559
QT GSP YA P+ SYD AS
Sbjct: 165 QTSCGSPHYASPEIIMGRSYDGCAS 189
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,212,394
Number of Sequences: 5004
Number of extensions: 43925
Number of successful extensions: 219
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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