Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E22
(582 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0469 + 10691648-10691692,10691755-10691907,10692043-106920... 38 0.006
11_06_0181 + 20985960-20987825,20987904-20989169 33 0.22
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 32 0.38
02_05_0981 - 33278735-33278746,33278882-33279022,33279145-332791... 31 0.51
11_06_0153 - 20693663-20693689,20693808-20694096,20694493-206948... 30 1.2
06_03_1190 - 28274801-28275163,28275662-28275853,28275965-282760... 30 1.5
11_06_0610 - 25449085-25453284 29 2.0
09_06_0141 - 21097479-21098094,21098209-21098970,21100463-21100548 29 2.0
04_04_0483 - 25554531-25554605,25554681-25555644,25555722-255558... 29 2.0
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 2.0
11_02_0047 + 7716315-7716420,7716518-7716647,7716785-7716856,771... 28 4.7
07_03_1681 + 28624899-28625075,28625224-28625400,28625508-286256... 28 4.7
12_01_1111 + 11842837-11843094,11843142-11843255,11843267-118442... 28 6.2
11_01_0522 - 4103138-4103926 28 6.2
04_04_0802 - 28155281-28155725,28155750-28156081,28156164-281562... 28 6.2
12_02_0305 - 17235832-17236379,17237345-17237444 27 8.2
05_06_0057 + 25253497-25253589,25253722-25253799,25254583-252546... 27 8.2
04_04_0323 - 24392043-24393021,24393135-24393544 27 8.2
04_01_0070 - 706640-706747,707221-707307,707397-707502,707585-70... 27 8.2
>02_02_0469 +
10691648-10691692,10691755-10691907,10692043-10692093,
10692162-10692224,10692327-10693031,10693128-10693223,
10693307-10695547
Length = 1117
Score = 37.9 bits (84), Expect = 0.006
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Frame = +2
Query: 179 RNNPPTSQHLSRQTSS---IDTYNSHRKIKRPKLIGDKKVYRPVR--RH---TLSRIDET 334
R NPP+ + L Q +S N ++ +P + D R RH ++S +++
Sbjct: 300 RRNPPSQKQLDVQRNSDQLTQADNLEERLSQPLISADSNEVNNKRMPRHAEISISTVEKE 359
Query: 335 PP---QTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVC---NQSHETVNQTEN 496
P Q + N +D ++ RPI+ + ++ S+ N+SH+ V +E
Sbjct: 360 PVDKLQRAGDYQEQSSNGIDKNTERPIVDKLGDQTSSIDHSLQHTEEHNRSHDNVESSEA 419
Query: 497 GSPQYAEPKDSDSSSYD 547
S + +SDSSS D
Sbjct: 420 PSEDTSSESNSDSSSGD 436
>11_06_0181 + 20985960-20987825,20987904-20989169
Length = 1043
Score = 32.7 bits (71), Expect = 0.22
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Frame = +2
Query: 170 APARNNPPTSQHLSRQTSSIDTYNSHRK--IKRPKLIGDKKVYRPVRRHTLSRIDETPPQ 343
A ++ TS+ LS Q SS+ + K + R + I + + H + D P
Sbjct: 215 AAKKSQLSTSEMLSFQRSSVPNQHQQGKCLVTRSEAI-QFSAMKQTKSH-ICAFDNDKPG 272
Query: 344 TVRPRSKSLQNSVDISSTRPILRSRSNISADTS------RSVPVCNQSHETVNQTENGSP 505
T+ P+S L++ + TR + N + +S R + V + S +N
Sbjct: 273 TLVPKSSDLKSISVKNLTRESAPAEENAAESSSLQILGKRKLYVTSDSSHGMNSNIKRQR 332
Query: 506 QYAEPKDSDSSS 541
+Y P DSDSS+
Sbjct: 333 KYTCPSDSDSSN 344
>10_08_0747 - 20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 31.9 bits (69), Expect = 0.38
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +2
Query: 191 PTSQHLSRQTSSIDTYNSHRKIKRPKLIG---------DKKVYRPVRRHTLSRIDETPPQ 343
P HL+ + +D+ NSHR +K KL G D+ +H L +++
Sbjct: 942 PVVVHLASEKCFVDSGNSHRAMKDKKLAGGSGSKSVQTDRAAKIAAIKHKLKSLEDEGCS 1001
Query: 344 TVRPRSKS 367
T RPR KS
Sbjct: 1002 TKRPRFKS 1009
>02_05_0981 -
33278735-33278746,33278882-33279022,33279145-33279199,
33279787-33279950,33280043-33280139,33280507-33280678,
33281107-33281182,33281545-33281661,33281928-33282007,
33282225-33282398,33282636-33282765,33282855-33282941,
33283039-33283302,33284131-33284256
Length = 564
Score = 31.5 bits (68), Expect = 0.51
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +1
Query: 352 APIKELAELG*HL-----VHATDITVQVEHIGRHESERARLQPEPRNGEPDRKW*STVR- 513
A KEL EL HL HA +T E+I R L P P N PD+K+ S V
Sbjct: 458 ASAKELLELPSHLRKACIAHAGRLTSLYEYIPRMRKTIIELPPAPTNLLPDKKYNSLVSL 517
Query: 514 GAERFRLFVVRPA 552
F F++ A
Sbjct: 518 SGHLFDKFLINEA 530
>11_06_0153 -
20693663-20693689,20693808-20694096,20694493-20694829,
20695304-20696516,20700247-20700744
Length = 787
Score = 30.3 bits (65), Expect = 1.2
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Frame = +2
Query: 170 APARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYR-PVRRHTLSRI---DETP 337
A R+ S+ S Q SS+ + ++ + L+ + + + T S I D
Sbjct: 204 AAKRSQLSPSEMFSFQRSSVPNQHGNQHQQGKCLVTRSEAIQFSAMKQTKSHICSSDNDK 263
Query: 338 PQTVRPRSKSLQNSVDISS-TRPILRSRSNISADTS------RSVPVCNQSHETVNQTEN 496
P T+ P+S L NS+ + + TR + N + +S R + V + S +N
Sbjct: 264 PGTLVPKSSDL-NSISVKNLTRESAPAEENAAESSSFQILGKRKLYVTSDSSHGMNSNIK 322
Query: 497 GSPQYAEPKDSDSSS 541
+Y P DSDSS+
Sbjct: 323 RQRKYICPSDSDSSN 337
>06_03_1190 -
28274801-28275163,28275662-28275853,28275965-28276088,
28276177-28276320,28276524-28276640,28277189-28277308,
28277433-28277521,28277609-28277685,28278250-28278322,
28278578-28279012,28280247-28280442,28281270-28281490,
28281591-28281703,28282552-28283146,28283236-28283418,
28283548-28283712,28283808-28284029
Length = 1142
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -1
Query: 318 DRVCRLTGRYTFLSPISFGLLIFRWELYVSMEEVCRERCWEV 193
DRV R G + + SP ++ + ++ M ++ R CW++
Sbjct: 293 DRVLRPGGYFVYSSPEAYAMDPINRNIWRKMSDLARRMCWQI 334
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 2.0
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 2/132 (1%)
Frame = +2
Query: 164 PQAPARNNPPTSQHLSRQTSSIDTY-NSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPP 340
P +PA++ PP + L T +I++ S + P + K P + S+ +P
Sbjct: 983 PPSPAKSTPPPEKPLPPHTPTINSSPPSEEEYMPPSPV--KSSPPPAEK---SQPPPSPV 1037
Query: 341 QTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPV-CNQSHETVNQTENGSPQYAE 517
++V P KS + S P +S TS P + HE ++ E Y
Sbjct: 1038 ESVLPPVKSSPPHAPVISEPPPTKSSPPQVPVTSEPPPAKSSPPHEPISPPETPEKSYPP 1097
Query: 518 PKDSDSSSYDLP 553
+SS +P
Sbjct: 1098 STPEESSPPSVP 1109
>09_06_0141 - 21097479-21098094,21098209-21098970,21100463-21100548
Length = 487
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 245 HRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKSLQNSVD 385
H ++R + GD++ RPVR TL+++D + R +SL NSV+
Sbjct: 91 HWYLRRRRTAGDRR--RPVRVSTLNKLDVIIGRYERHGMRSLANSVN 135
>04_04_0483 -
25554531-25554605,25554681-25555644,25555722-25555847,
25556162-25556331,25556431-25556526
Length = 476
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/106 (22%), Positives = 46/106 (43%)
Frame = +2
Query: 188 PPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKS 367
P +S + S + N+HR R + + + V PV+ + + + + +K
Sbjct: 270 PKSSSTSVEEQSPLIQRNNHRD--RGQYV--RPVLNPVQNMSQWKEVKAQAAPAKKSNKE 325
Query: 368 LQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSP 505
NSV P + +S D S S + + + TV++ ++GSP
Sbjct: 326 NVNSVPKVGATPENSIKKEVSVDASLSTWLVSSDNSTVDKVQSGSP 371
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 311 TLSRIDETPPQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETV--- 481
T I E+ PQ + +S+Q+ D +T P L S NI + + SVP N + E
Sbjct: 884 TEESITESEPQILE--IESVQDMEDTEATEPELVSEQNIVSTSEESVPEENATTEEPAFH 941
Query: 482 -NQTENGSPQYAEPKDS 529
+ +N + E DS
Sbjct: 942 DREIQNDGAELTEQHDS 958
>11_02_0047 +
7716315-7716420,7716518-7716647,7716785-7716856,
7717007-7717078,7717274-7717345,7717684-7717845,
7718105-7718176,7718435-7718503,7718788-7718859,
7718992-7719129,7719386-7719888,7720007-7720171,
7720267-7720403,7720488-7720707,7720793-7721028,
7721165-7721632
Length = 897
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 369 KLFDRGRTVCGGVSSIRDRVCRLTGRYTFLSPISFGLLIFRWELYVSMEEVCRE 208
K +RGR + V DR L G + L P+ + +ELYV + C E
Sbjct: 776 KPLERGRYIVREVKGAMDRTKDLYGLHELLDPMLAPTSLAGFELYVDLALKCVE 829
>07_03_1681 +
28624899-28625075,28625224-28625400,28625508-28625673,
28625761-28626152
Length = 303
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 286 SVPAGKATYPVSNRRDASADGPAPIKELAEL-G*HLVHATDITVQVEHIGRHESERARLQ 462
+V G+ +N A+ D PAP LAEL G D+T V G H +A+ Q
Sbjct: 125 TVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQ 184
>12_01_1111 +
11842837-11843094,11843142-11843255,11843267-11844247,
11861747-11862025,11862998-11863098,11863723-11863792,
11863947-11863974,11864057-11864114,11864440-11864536
Length = 661
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 191 PTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKSL 370
P Q L Q TY +H K + + IG++ + R + T QT +PR+++L
Sbjct: 430 PEYQRLVDQELWRQTYVNHAKRRTDRTIGEEGLSRLHNSELSPSQNRTNAQTGKPRTRTL 489
Query: 371 Q 373
+
Sbjct: 490 E 490
>11_01_0522 - 4103138-4103926
Length = 262
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 366 ACRTRLTSRP-RDRYYGPGRTYRQTRVGACPFATRAT 473
ACR+ ++ P R RY G G YR A RAT
Sbjct: 119 ACRSAASASPCRSRYAGGGSAYRPRPTAFLDLAPRAT 155
>04_04_0802 -
28155281-28155725,28155750-28156081,28156164-28156266,
28156347-28156528,28156617-28156800,28156872-28156960,
28157634-28157710,28157837-28157927,28158230-28158430
Length = 567
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 83 SQYGPYNY*ACDQMRDIDAAHFANAAGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKR 262
S+ +Y CD+ + N A A RN+ TS H+ ++ + Y H++ R
Sbjct: 388 SRMAALDYIVCDKSDVFVTNNNGNMARMLAGRRNSLGTSGHILKRKLNFRRYFGHKRTIR 447
Query: 263 PKLIGDKKVY 292
P KK+Y
Sbjct: 448 PNA---KKLY 454
>12_02_0305 - 17235832-17236379,17237345-17237444
Length = 215
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 146 FANAAGPQAPARNNPPTSQHLSRQTS 223
FA A PQ P R NPP + R+ S
Sbjct: 64 FAQAKQPQTPPRRNPPRAPPSPRRAS 89
>05_06_0057 +
25253497-25253589,25253722-25253799,25254583-25254621,
25254724-25255263,25255352-25255450,25255614-25255691,
25255961-25256146,25256240-25256365
Length = 412
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 425 ISADTSRSVPVCNQSHETVNQTE-NGSPQYAEPKDSDSSSYDLPASMTDLPIM 580
+ A S SV Q H + Q + S Q +P SS PAS DLP M
Sbjct: 82 VQATPSSSVKPTVQDHSSFPQPQLPSSQQNIQPSGPFSSGPSNPASSLDLPAM 134
>04_04_0323 - 24392043-24393021,24393135-24393544
Length = 462
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = -2
Query: 488 SGSPFRGSGCKRARSDSCLPICSTWTVISVAWTRCQPSSASSLIGAGPSAEASRRFETGY 309
S SP R G ++ + SC P CS A +++S + S+ +S T
Sbjct: 209 SPSPNRAKGKRQPGAASCFPFCSVGATKPAASADSPSPTSTSRTASASSSSSSSTATTAS 268
Query: 308 VALPAG 291
+ AG
Sbjct: 269 SSTAAG 274
>04_01_0070 -
706640-706747,707221-707307,707397-707502,707585-707693,
707766-708145,708508-708601,709351-709475,709633-709674,
710822-710892,710979-711060,711157-711277,712404-712713
Length = 544
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +2
Query: 365 SLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQTENGSP-QYAEPKDSDSSS 541
SLQNSVD+SS L A +VPV N T+ P + + S
Sbjct: 332 SLQNSVDVSSG---LNDSIQGEAQEPTAVPVENTQPSVPQPTDTAVPDEKTQSPKEQSID 388
Query: 542 YDLPASMTD 568
D+P + D
Sbjct: 389 IDIPEPLLD 397
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,993,700
Number of Sequences: 37544
Number of extensions: 354853
Number of successful extensions: 1385
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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