Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_E22
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   0.77 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    26   1.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.1  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         23   5.5  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         23   5.5  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         23   5.5  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         23   5.5  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   5.5  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    23   5.5  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   5.5  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   5.5  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   7.2  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 1/126 (0%)
 Frame = +2

Query: 128  DIDAAHFANAAGPQAPARNNPPTSQHLSRQTSSI-DTYNSHRKIKRPKLIGDKKVYRPVR 304
            D D +    A+G ++   +  P ++   R  S   D+  S R+ +     G     R  R
Sbjct: 1022 DSDDSRLKIASGDESGGESGAPATKRKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRS-R 1080

Query: 305  RHTLSRIDETPPQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVN 484
              + SR         R RS+S   S   S +    RSRS   +  SRS        ++  
Sbjct: 1081 SGSGSRAGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAG 1140

Query: 485  QTENGS 502
              ++GS
Sbjct: 1141 SRKSGS 1146


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 206 LSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRR 307
           +++  S+IDTY +  + K+ + +  K+ Y  VRR
Sbjct: 356 VAKTDSTIDTYRADIESKKQEYVALKEAYGTVRR 389


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 443  RSVPVCNQSHETVNQTENGSPQYAEPKDSDSSSYDLPA 556
            +S  VC Q   TVN TE   P   + + S +S  ++PA
Sbjct: 1164 KSCSVCRQISPTVNSTE---PVCVKCRKSGNSHQEVPA 1198


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 510  YCGLPFSVWFTVSWLWL 460
            +  L F V+FT +W WL
Sbjct: 1358 WLALGFKVYFTNAWCWL 1374


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 396 VDEMSTEFCKLFDRGRTVCGG 334
           V  ++T    L DRGRT C G
Sbjct: 22  VRSVTTASGSLIDRGRTFCSG 42


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 396 VDEMSTEFCKLFDRGRTVCGG 334
           V  ++T    L DRGRT C G
Sbjct: 22  VRSVTTASGSLIDRGRTFCSG 42


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 396 VDEMSTEFCKLFDRGRTVCGG 334
           V  ++T    L DRGRT C G
Sbjct: 22  VRSVTTASGSLIDRGRTFCSG 42


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 396 VDEMSTEFCKLFDRGRTVCGG 334
           V  ++T    L DRGRT C G
Sbjct: 22  VRSVTTASGSLIDRGRTFCSG 42


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 363 RACRTRLTSRPRDRYYGP 416
           + C  + T+RPR R+Y P
Sbjct: 47  KLCHAKNTTRPRTRWYIP 64


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 363 RACRTRLTSRPRDRYYGP 416
           + C  + T+RPR R+Y P
Sbjct: 47  KLCHAKNTTRPRTRWYIP 64


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 396 VDEMSTEFCKLFDRGRTVCGG 334
           V  ++T    L DRGRT C G
Sbjct: 40  VRSVTTASGSLIDRGRTFCSG 60


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 396 VDEMSTEFCKLFDRGRTVCGG 334
           V  ++T    L DRGRT C G
Sbjct: 40  VRSVTTASGSLIDRGRTFCSG 60


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 363 RACRTRLTSRPRDRYYGP 416
           + C  R T++PR R+Y P
Sbjct: 47  KLCHARNTTQPRTRWYIP 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,604
Number of Sequences: 2352
Number of extensions: 11925
Number of successful extensions: 64
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)