Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_E19
         (330 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131105-1|BAC85155.1|  638|Homo sapiens FLJ00362 protein protein.     29   4.6  
AL031587-9|CAB37479.1|  504|Homo sapiens solute carrier family 1...    28   6.0  
AF132611-1|AAF03489.1|  504|Homo sapiens monocarboxylate transpo...    28   6.0  
AF132610-1|AAF03565.1|  504|Homo sapiens monocarboxylate transpo...    28   6.0  

>AK131105-1|BAC85155.1|  638|Homo sapiens FLJ00362 protein protein.
          Length = 638

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 203 EPCYRFESYAAVAEPAGGKLCSRARLKPHPYLPAEP 310
           EP Y    + +   PA   LC   R +PH +LPA P
Sbjct: 136 EPIYPLPIHCSQF-PASLSLCDLRRAQPHSFLPAAP 170


>AL031587-9|CAB37479.1|  504|Homo sapiens solute carrier family 16,
           member 8 (monocarboxylic acid transporter 3) protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 236 VAEPAGGKLCSRARLKPH-PYL 298
           VA PA G L   ARL+PH PYL
Sbjct: 301 VARPACGALAGLARLRPHVPYL 322


>AF132611-1|AAF03489.1|  504|Homo sapiens monocarboxylate
           transporter MCT3 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 236 VAEPAGGKLCSRARLKPH-PYL 298
           VA PA G L   ARL+PH PYL
Sbjct: 301 VARPACGALAGLARLRPHVPYL 322


>AF132610-1|AAF03565.1|  504|Homo sapiens monocarboxylate
           transporter MCT3 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 236 VAEPAGGKLCSRARLKPH-PYL 298
           VA PA G L   ARL+PH PYL
Sbjct: 301 VARPACGALAGLARLRPHVPYL 322


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.306    0.126    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,102,598
Number of Sequences: 237096
Number of extensions: 232322
Number of successful extensions: 476
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)