Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_E18
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.      118   3e-29
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   0.78 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.2  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   4.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   4.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   5.5  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   5.5  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score =  118 bits (284), Expect = 3e-29
 Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
 Frame = +2

Query: 8   GSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYV 175
           GSGKT A+ +P I  +  +            P  ++++PTREL  QI Q   +F  +S +
Sbjct: 243 GSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSIL 302

Query: 176 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 355
           +    +GG     Q   L  G  I++ATPGRL+DF+EKG        +LVLDEADRMLDM
Sbjct: 303 KTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDM 362

Query: 356 GFEPQIRKIIDQ--IRP--DRQTLMWSATWXKEVRKLAEDY*GDYVQINIG 496
           GF P I K++D   + P  +RQTLM+SAT+  EV+ LA  +  +Y+ + +G
Sbjct: 363 GFLPSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVG 413


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 478 IVSLIILCKFPYFFXPCCRPHKSLP--IRAYLVDNFPNLWL 362
           I+S  I+C  P+F     RP    P  I A+L   F  LWL
Sbjct: 377 IMSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSSLF--LWL 415



 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 103 SSSNKRTCSTNTAGCF 150
           SSS   TCS +T  CF
Sbjct: 285 SSSASTTCSGHTVRCF 300


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 123 LLNKYSRLLQNLAIHLMFVIHVCLEVPL 206
           L NK+  L + L IH+    ++ L+ P+
Sbjct: 613 LANKFESLSEPLRIHVSPTTYILLKYPI 640


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 468 KETMSKLILDHF 503
           KET  KLI DHF
Sbjct: 158 KETQQKLIDDHF 169


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 369 KLGKLSTKYALIGKLLCGL 425
           K GK+   +A IG ++C L
Sbjct: 151 KRGKIMLSFAWIGSVVCSL 169


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 468 KETMSKLILDHF 503
           KET  KLI DHF
Sbjct: 174 KETQQKLIDDHF 185


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 289 GYYKLTKMH 315
           GYYKL K+H
Sbjct: 72  GYYKLNKIH 80


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 130 TNTAGCFRIWQFILC 174
           T+T GC   WQF  C
Sbjct: 120 TSTEGCEVAWQFGKC 134


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 130 TNTAGCFRIWQFILC 174
           T+T GC   WQF  C
Sbjct: 94  TSTEGCEVAWQFGKC 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,170
Number of Sequences: 438
Number of extensions: 3021
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)