Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_E16
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 7.8
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 7.8
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 7.8
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 416 ISLTPQSPIDSRISSQNSEDYSTRDAPVCLT 324
+++TP+ PI+S++S+ +D R++ V T
Sbjct: 187 VTVTPEEPIESKMSAMGIDDDKKRNSKVVST 217
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 411 PDPSESDRQQD*LPELRRLLHEGRTCVPHPADLSVGADKGEAXPS-XXGIXPDAVSPCPL 235
PD ++ QD + LHE V P L + A PS + PD+ P+
Sbjct: 1594 PDLISNNESQDTPGAVNNHLHENHDAVQTPIQLQPASQHQVAQPSPRPAVAPDSQQNGPV 1653
Query: 234 LVT 226
LV+
Sbjct: 1654 LVS 1656
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 411 PDPSESDRQQD*LPELRRLLHEGRTCVPHPADLSVGADKGEAXPS-XXGIXPDAVSPCPL 235
PD ++ QD + LHE V P L + A PS + PD+ P+
Sbjct: 1885 PDLISNNESQDTPGAVNNHLHENHDAVQTPIQLQPASQHQVAQPSPRPAVAPDSQQNGPV 1944
Query: 234 LVT 226
LV+
Sbjct: 1945 LVS 1947
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 411 PDPSESDRQQD*LPELRRLLHEGRTCVPHPADLSVGADKGEAXPS-XXGIXPDAVSPCPL 235
PD ++ QD + LHE V P L + A PS + PD+ P+
Sbjct: 1900 PDLISNNESQDTPGAVNNHLHENHDAVQTPIQLQPASQHQVAQPSPRPAVAPDSQQNGPV 1959
Query: 234 LVT 226
LV+
Sbjct: 1960 LVS 1962
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 411 PDPSESDRQQD*LPELRRLLHEGRTCVPHPADLSVGADKGEAXPS-XXGIXPDAVSPCPL 235
PD ++ QD + LHE V P L + A PS + PD+ P+
Sbjct: 1704 PDLISNNESQDTPGAVNNHLHENHDAVQTPIQLQPASQHQVAQPSPRPAVAPDSQQNGPV 1763
Query: 234 LVT 226
LV+
Sbjct: 1764 LVS 1766
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 411 PDPSESDRQQD*LPELRRLLHEGRTCVPHPADLSVGADKGEAXPS-XXGIXPDAVSPCPL 235
PD ++ QD + LHE V P L + A PS + PD+ P+
Sbjct: 1594 PDLISNNESQDTPGAVNNHLHENHDAVQTPIQLQPASQHQVAQPSPRPAVAPDSQQNGPV 1653
Query: 234 LVT 226
LV+
Sbjct: 1654 LVS 1656
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 411 PDPSESDRQQD*LPELRRLLHEGRTCVPHPADLSVGADKGEAXPS-XXGIXPDAVSPCPL 235
PD ++ QD + LHE V P L + A PS + PD+ P+
Sbjct: 1885 PDLISNNESQDTPGAVNNHLHENHDAVQTPIQLQPASQHQVAQPSPRPAVAPDSQQNGPV 1944
Query: 234 LVT 226
LV+
Sbjct: 1945 LVS 1947
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 411 PDPSESDRQQD*LPELRRLLHEGRTCVPHPADLSVGADKGEAXPS-XXGIXPDAVSPCPL 235
PD ++ QD + LHE V P L + A PS + PD+ P+
Sbjct: 1900 PDLISNNESQDTPGAVNNHLHENHDAVQTPIQLQPASQHQVAQPSPRPAVAPDSQQNGPV 1959
Query: 234 LVT 226
LV+
Sbjct: 1960 LVS 1962
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 411 PDPSESDRQQD*LPELRRLLHEGRTCVPHPADLSVGADKGEAXPS-XXGIXPDAVSPCPL 235
PD ++ QD + LHE V P L + A PS + PD+ P+
Sbjct: 1704 PDLISNNESQDTPGAVNNHLHENHDAVQTPIQLQPASQHQVAQPSPRPAVAPDSQQNGPV 1763
Query: 234 LVT 226
LV+
Sbjct: 1764 LVS 1766
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,833,263
Number of Sequences: 27780
Number of extensions: 172607
Number of successful extensions: 329
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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