Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_E11
         (215 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    52   8e-10
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   1.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   1.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   1.7  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   2.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   2.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    20   2.9  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    20   3.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   3.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   5.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   5.1  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    19   8.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    19   8.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    19   8.8  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    19   8.8  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 52.0 bits (119), Expect = 8e-10
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
 Frame = +2

Query: 32  MENWK--YRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNE 205
           MEN K  YR I  + F +G  A+Q  +++  VYG + +K+   + WF +FRSG+F L++E
Sbjct: 1   MENQKEHYRHILLFYFRKGKNASQAHKKLCAVYGDEALKERQCQNWFDKFRSGDFSLKDE 60

Query: 206 PR 211
            R
Sbjct: 61  KR 62


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 178 TKTLKPKTYRAFFYSIFPIHVIY 110
           T +++PK     F  +FP H+++
Sbjct: 199 TLSVEPKVSPMTFCRVFPFHLMF 221


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 178 TKTLKPKTYRAFFYSIFPIHVIY 110
           T +++PK     F  +FP H+++
Sbjct: 199 TLSVEPKVSPMTFCRVFPFHLMF 221


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3

Query: 15  WKVEVEWKTGNI 50
           W + V WK G++
Sbjct: 98  WAITVSWKAGDV 109


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 96  CVAQVPRWN 70
           CV ++PRW+
Sbjct: 180 CVVKIPRWD 188


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 149 CFFLQYLSHTRH 114
           C+F  +++H RH
Sbjct: 164 CYFTAHVTHPRH 175


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 144 FFTVSFPYTSFIL 106
           +F  +FP TSFIL
Sbjct: 6   YFGKNFPSTSFIL 18


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 159 KRTVLFFTVSFPYTSFILRAVCV 91
           +R  LF+TV+    + ++  +CV
Sbjct: 230 RRKTLFYTVNLILPTVLISFLCV 252


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 61  INKAIFPVFHSTSTFQY 11
           +N+  +P F+ T+  QY
Sbjct: 371 LNEDFYPTFNQTNVDQY 387


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 203 RSVGQNFRNENVETKNVPCFFLQY 132
           RS+   +++++ +T  V  + LQY
Sbjct: 922 RSINVKWQHKSQDTTEVTKYILQY 945


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 203 RSVGQNFRNENVETKNVPCFFLQY 132
           RS+   +++++ +T  V  + LQY
Sbjct: 918 RSINVKWQHKSQDTTEVTKYILQY 941


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 156 VFGFNVFVPE 185
           +FG+N +VPE
Sbjct: 187 MFGWNRYVPE 196


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 192 SKFPERKR*NQKRTVLFFTVSFPY 121
           SKFP R +     + +FF + F +
Sbjct: 406 SKFPTRSKRIDVISRIFFPIVFAF 429


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 192 SKFPERKR*NQKRTVLFFTVSFPY 121
           SKFP R +     + +FF + F +
Sbjct: 406 SKFPTRSKRIDVISRIFFPIVFAF 429


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 156 VFGFNVFVPE 185
           +FG+N +VPE
Sbjct: 63  MFGWNRYVPE 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,947
Number of Sequences: 438
Number of extensions: 1336
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)